RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 PHIPQ8WWQ0 1821 aa26.24■■□□□ 1.79
APOE-204ENST00000446996 CXCL11O14625 94 aa26.24■■□□□ 1.79
APOE-204ENST00000446996 FOXP2O15409 715 aa26.24■■□□□ 1.79
APOE-204ENST00000446996 HSPD1P10809 573 aaKnown RBP26.24■■□□□ 1.79
APOE-204ENST00000446996 CERKLQ49MI3 558 aaPredicted RBP26.24■■□□□ 1.79
APOE-204ENST00000446996 ZNF589Q86UQ0 364 aaPredicted RBP26.24■■□□□ 1.79
APOE-204ENST00000446996 MS4A4AQ96JQ5 239 aa26.24■■□□□ 1.79
APOE-204ENST00000446996 IRF6O14896 467 aa26.23■■□□□ 1.79
APOE-204ENST00000446996 CA12O43570 354 aa26.23■■□□□ 1.79
APOE-204ENST00000446996 CNKSR2Q8WXI2 1034 aa26.23■■□□□ 1.79
APOE-204ENST00000446996 CCDC17Q96LX7 622 aa26.23■■□□□ 1.79
APOE-204ENST00000446996 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.23■■□□□ 1.79
APOE-204ENST00000446996 USP17L5A8MUK1 530 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 HSPA1AP0DMV8 641 aaKnown RBP26.22■■□□□ 1.79
APOE-204ENST00000446996 HSPA1BP0DMV9 641 aaKnown RBP26.22■■□□□ 1.79
APOE-204ENST00000446996 CDK8P49336 464 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 MKRN3Q13064 507 aaKnown RBP26.22■■□□□ 1.79
APOE-204ENST00000446996 SNAPC2Q13487 334 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 VPS53Q5VIR6 699 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 BEGAINQ9BUH8 593 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 AS3MTQ9HBK9 375 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 ZNF287Q9HBT7 754 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 CABP5Q9NP86 173 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 AFG3L2Q9Y4W6 797 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 ZHX2Q9Y6X8 837 aa26.22■■□□□ 1.79
APOE-204ENST00000446996 CYP2D7A0A087X1C5 515 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 MINDY4BA8MYZ0 360 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 CETPP11597 493 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 EVX2Q03828 476 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 SKAP1Q86WV1 359 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 DYNLL2Q96FJ2 89 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 WDR18Q9BV38 432 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 DSCC1Q9BVC3 393 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 ZBTB21Q9ULJ3 1066 aa26.21■■□□□ 1.79
APOE-204ENST00000446996 ALDH1A1P00352 501 aa26.2■■□□□ 1.78
APOE-204ENST00000446996 SLC3A2P08195 630 aaKnown RBP26.2■■□□□ 1.78
APOE-204ENST00000446996 ABCB5Q2M3G0 1257 aa26.2■■□□□ 1.78
APOE-204ENST00000446996 SAGE1Q9NXZ1 904 aa26.2■■□□□ 1.78
APOE-204ENST00000446996 ANAPC4Q9UJX5 808 aa26.2■■□□□ 1.78
APOE-204ENST00000446996 GDF11O95390 407 aa26.19■■□□□ 1.78
APOE-204ENST00000446996 FGAP02671 866 aa26.19■■□□□ 1.78
APOE-204ENST00000446996 PPARAQ07869 468 aa26.19■■□□□ 1.78
APOE-204ENST00000446996 OTUD7BQ6GQQ9 843 aa26.19■■□□□ 1.78
APOE-204ENST00000446996 JAG1P78504 1218 aa26.18■■□□□ 1.78
APOE-204ENST00000446996 ZNF280CQ8ND82 737 aa26.18■■□□□ 1.78
APOE-204ENST00000446996 ZCCHC17Q9NP64 241 aaKnown RBP26.18■■□□□ 1.78
APOE-204ENST00000446996 PTPRFP10586 1907 aa26.18■■□□□ 1.78
APOE-204ENST00000446996 CCL15-CCL14A0A0B4J2E2 113 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 SGSM2O43147 1006 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 GH2P01242 217 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 PDE4BQ07343 736 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 CCL15Q16663 113 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 COL13A1Q5TAT6 717 aaPredicted RBP26.17■■□□□ 1.78
APOE-204ENST00000446996 IFNL1Q8IU54 200 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 SLC44A5Q8NCS7 719 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 CFHR5Q9BXR6 569 aa26.17■■□□□ 1.78
APOE-204ENST00000446996 A0A0G2JLL6 359 aaPredicted RBP26.16■■□□□ 1.78
APOE-204ENST00000446996 SMIM22K7EJ46 135 aa26.16■■□□□ 1.78
APOE-204ENST00000446996 TMEM179Q6ZVK1 233 aa26.16■■□□□ 1.78
APOE-204ENST00000446996 PRRT2Q7Z6L0 340 aaPredicted RBP26.16■■□□□ 1.78
APOE-204ENST00000446996 BRI3BPQ8WY22 251 aa26.16■■□□□ 1.78
APOE-204ENST00000446996 MKNK2Q9HBH9 465 aa26.16■■□□□ 1.78
APOE-204ENST00000446996 SH3D19Q5HYK7 790 aa26.15■■□□□ 1.78
APOE-204ENST00000446996 FASTKD5Q7L8L6 764 aaKnown RBP26.15■■□□□ 1.78
APOE-204ENST00000446996 RNF186Q9NXI6 227 aa26.15■■□□□ 1.78
APOE-204ENST00000446996 CTNNA3Q9UI47 895 aa26.15■■□□□ 1.78
APOE-204ENST00000446996 C19orf81C9J6K1 198 aa26.14■■□□□ 1.78
APOE-204ENST00000446996 FGRP09769 529 aa26.14■■□□□ 1.78
APOE-204ENST00000446996 SPP2Q13103 211 aa26.14■■□□□ 1.78
APOE-204ENST00000446996 PTPN18Q99952 460 aa26.14■■□□□ 1.78
APOE-204ENST00000446996 IL25Q9H293 177 aa26.14■■□□□ 1.78
APOE-204ENST00000446996 IGF2BP3O00425 579 aaKnown RBP eCLIP26.13■■□□□ 1.77
APOE-204ENST00000446996 PCP11498 1178 aaKnown RBP26.13■■□□□ 1.77
APOE-204ENST00000446996 RASA1P20936 1047 aa26.13■■□□□ 1.77
APOE-204ENST00000446996 GUCY1A2P33402 732 aa26.13■■□□□ 1.77
APOE-204ENST00000446996 NT5C2P49902 561 aa26.13■■□□□ 1.77
APOE-204ENST00000446996 MOGSQ13724 837 aa26.13■■□□□ 1.77
APOE-204ENST00000446996 ZNF444Q8N0Y2 327 aaPredicted RBP26.13■■□□□ 1.77
APOE-204ENST00000446996 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.13■■□□□ 1.77
APOE-204ENST00000446996 USP17L10C9JJH3 530 aa26.12■■□□□ 1.77
APOE-204ENST00000446996 AKR1B1P15121 316 aa26.12■■□□□ 1.77
APOE-204ENST00000446996 BACE1P56817 501 aa26.12■■□□□ 1.77
APOE-204ENST00000446996 CASC1Q6TDU7 716 aa26.12■■□□□ 1.77
APOE-204ENST00000446996 ANKRD23Q86SG2 305 aa26.12■■□□□ 1.77
APOE-204ENST00000446996 CCDC84Q86UT8 332 aaPredicted RBP26.12■■□□□ 1.77
APOE-204ENST00000446996 PROCA1Q8NCQ7 364 aaPredicted RBP26.12■■□□□ 1.77
APOE-204ENST00000446996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.12■■□□□ 1.77
APOE-204ENST00000446996 GREB1LQ9C091 1923 aaPredicted RBP26.12■■□□□ 1.77
APOE-204ENST00000446996 TRIM75PA6NK02 468 aa26.11■■□□□ 1.77
APOE-204ENST00000446996 MPHOSPH10O00566 681 aaKnown RBP26.11■■□□□ 1.77
APOE-204ENST00000446996 CDC45O75419 566 aa26.11■■□□□ 1.77
APOE-204ENST00000446996 CTCFP49711 727 aaPredicted RBP26.11■■□□□ 1.77
APOE-204ENST00000446996 RAB3GAP1Q15042 981 aa26.11■■□□□ 1.77
APOE-204ENST00000446996 SHROOM1Q2M3G4 852 aaPredicted RBP26.11■■□□□ 1.77
APOE-204ENST00000446996 ESYT1Q9BSJ8 1104 aa26.11■■□□□ 1.77
APOE-204ENST00000446996 SLC45A1Q9Y2W3 748 aa26.11■■□□□ 1.77
APOE-204ENST00000446996 LAMA4Q16363 1823 aa26.1■■□□□ 1.77
APOE-204ENST00000446996 BTBD19C9JJ37 291 aa26.1■■□□□ 1.77
APOE-204ENST00000446996 ZNF213O14771 459 aa26.1■■□□□ 1.77
APOE-204ENST00000446996 ORC4O43929 436 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms