RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 RNF187Q5TA31 235 aaPredicted RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 ANKS4BQ8N8V4 417 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 NEK11Q8NG66 645 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 IQCDQ96DY2 449 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 SETBP1Q9Y6X0 1596 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 TRIM75PA6NK02 468 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 EFCAB8A8MWE9 144 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 ATP2A1O14983 1001 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 TBCAO75347 108 aaKnown RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 PFKFB1P16118 471 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 ZNF589Q86UQ0 364 aaPredicted RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 ZNF274Q96GC6 653 aaPredicted RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 DNAJC5Q9H3Z4 198 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 TLR7Q9NYK1 1049 aaKnown RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 NUB1Q9Y5A7 615 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 TULP4Q9NRJ4 1543 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 IRX1P78414 480 aaPredicted RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 KIF5AQ12840 1032 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 PPP2R5BQ15173 497 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 IGSF22Q8N9C0 903 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 JAKMIP2Q96AA8 810 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 SPAG5Q96R06 1193 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 CCDC113Q9H0I3 377 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 TMEM165Q9HC07 324 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 GPBP1L1Q9HC44 474 aaPredicted RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 GUCA1BQ9UMX6 200 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 ABCA9Q8IUA7 1624 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 RPAP1Q9BWH6 1393 aaPredicted RBP7.12□□□□□ -1.27
BDNF-211ENST00000439476 ATP10DQ9P241 1426 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CYP21A2P08686 494 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 GPTP24298 496 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CTNNA2P26232 953 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 RBM6P78332 1123 aaKnown RBP7.12□□□□□ -1.27
BDNF-211ENST00000439476 RESTQ13127 1097 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 SF3B2Q13435 895 aaKnown RBP7.12□□□□□ -1.27
BDNF-211ENST00000439476 CLUL1Q15846 466 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 DPCR1Q3MIW9 517 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CCDC144BQ3MJ40 725 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 PLA2G4DQ86XP0 818 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.12□□□□□ -1.27
BDNF-211ENST00000439476 DSCC1Q9BVC3 393 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 TSPOAP1O95153 1857 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 TSPY2A6NKD2 308 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CUTAO60888 179 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 GIGYF1O75420 1035 aaPredicted RBP7.12□□□□□ -1.27
BDNF-211ENST00000439476 DNA2P51530 1060 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 E2F5Q15329 346 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CCDC152Q4G0S7 254 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CCDC174Q6PII3 467 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 MAATS1Q7Z4T9 603 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 NSUN7Q8NE18 718 aaKnown RBP7.12□□□□□ -1.27
BDNF-211ENST00000439476 PGBD1Q96JS3 809 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 IGSF1Q8N6C5 1336 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CEP152O94986 1710 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 PLCG2P16885 1265 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 ADKP55263 362 aaKnown RBP7.12□□□□□ -1.27
BDNF-211ENST00000439476 PNOCQ13519 176 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 WDR78Q5VTH9 848 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 KRT40Q6A162 431 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 ZNF790Q6PG37 636 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 SARM1Q6SZW1 724 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 TRIML1Q8N9V2 468 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 MLKLQ8NB16 471 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 PHC3Q8NDX5 983 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 TSNARE1Q96NA8 513 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 CABP5Q9NP86 173 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 PPP2R2CQ9Y2T4 447 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 IKBKGQ9Y6K9 419 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 KDRP35968 1356 aa7.12□□□□□ -1.27
BDNF-211ENST00000439476 A0A1W2PQ27 194 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 A0A1W2PQ64 194 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 A0A1W2PQD8 194 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 EBAG9O00559 213 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 POLR2DO15514 142 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 IDEP14735 1019 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 IBSPP21815 317 aaPredicted RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 CMA1P23946 247 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 VAV2P52735 878 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 NME8Q8N427 588 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 SPATS2LQ9NUQ6 558 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 ANGEL1Q9UNK9 670 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 ADCY9O60503 1353 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 METP08581 1390 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 EYA2O00167 538 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 STAT6P42226 847 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 CLCN6P51797 869 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 RBBP5Q15291 538 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 VWA3BQ502W6 1294 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 CAPZA3Q96KX2 299 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 RTEL1Q9NZ71 1219 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 CLIC4Q9Y696 253 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 ABCC3O15438 1527 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 NEO1Q92859 1461 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 NEURL1BA8MQ27 555 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 KRT13P13646 458 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 PDIA3P30101 505 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 BICDL1Q6ZP65 573 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 KRT28Q7Z3Y7 464 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms