RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 IFIT1P09914 478 aaKnown RBP13.99□□□□□ -0.17
CSTF3-203ENST00000438862 SHHQ15465 462 aa13.99□□□□□ -0.17
CSTF3-203ENST00000438862 DIXDC1Q155Q3 683 aa13.99□□□□□ -0.17
CSTF3-203ENST00000438862 ZSCAN29Q8IWY8 852 aaPredicted RBP13.99□□□□□ -0.17
CSTF3-203ENST00000438862 RNF166Q96A37 237 aaPredicted RBP13.99□□□□□ -0.17
CSTF3-203ENST00000438862 SENP6Q9GZR1 1112 aaPredicted RBP13.99□□□□□ -0.17
CSTF3-203ENST00000438862 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
CSTF3-203ENST00000438862 MORF4L1Q9UBU8 362 aa13.99□□□□□ -0.17
CSTF3-203ENST00000438862 F6X3S4 739 aa13.98□□□□□ -0.17
CSTF3-203ENST00000438862 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
CSTF3-203ENST00000438862 RGS3P49796 1198 aa13.98□□□□□ -0.17
CSTF3-203ENST00000438862 DIEXFQ68CQ4 756 aaKnown RBP13.98□□□□□ -0.17
CSTF3-203ENST00000438862 VGLL2Q8N8G2 317 aa13.98□□□□□ -0.17
CSTF3-203ENST00000438862 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
CSTF3-203ENST00000438862 RAPGEFL1Q9UHV5 662 aa13.98□□□□□ -0.17
CSTF3-203ENST00000438862 ALDH1L1O75891 902 aa13.97□□□□□ -0.17
CSTF3-203ENST00000438862 LDHBP07195 334 aaKnown RBP13.97□□□□□ -0.17
CSTF3-203ENST00000438862 SPP2Q13103 211 aa13.97□□□□□ -0.17
CSTF3-203ENST00000438862 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
CSTF3-203ENST00000438862 LRRC24Q50LG9 513 aa13.97□□□□□ -0.17
CSTF3-203ENST00000438862 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
CSTF3-203ENST00000438862 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
CSTF3-203ENST00000438862 MYH13Q9UKX3 1938 aa13.97□□□□□ -0.17
CSTF3-203ENST00000438862 MAST2Q6P0Q8 1798 aa13.96□□□□□ -0.17
CSTF3-203ENST00000438862 TBC1D12O60347 775 aa13.96□□□□□ -0.17
CSTF3-203ENST00000438862 CCND3P30281 292 aaPredicted RBP13.96□□□□□ -0.17
CSTF3-203ENST00000438862 MAPK4P31152 587 aa13.96□□□□□ -0.17
CSTF3-203ENST00000438862 PUM3Q15397 648 aaKnown RBP13.96□□□□□ -0.17
CSTF3-203ENST00000438862 SH3BP5LQ7L8J4 393 aa13.96□□□□□ -0.17
CSTF3-203ENST00000438862 OSBPL5Q9H0X9 879 aaPredicted RBP13.96□□□□□ -0.17
CSTF3-203ENST00000438862 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
CSTF3-203ENST00000438862 MSCO60682 206 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 FGFR2P21802 821 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 PRDX5P30044 214 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 RGS2P41220 211 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 SH3D19Q5HYK7 790 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
CSTF3-203ENST00000438862 GPRC5AQ8NFJ5 357 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 USP6NLQ92738 828 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 KAZALD1Q96I82 304 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 LOC285556D6RIA3 1793 aa13.95□□□□□ -0.18
CSTF3-203ENST00000438862 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 ANP32CO43423 234 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 HMGCS2P54868 508 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 MAP3K12Q12852 859 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 RABL6Q3YEC7 729 aaPredicted RBP13.94□□□□□ -0.18
CSTF3-203ENST00000438862 C9orf50Q5SZB4 431 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 CCAR1Q8IX12 1150 aaKnown RBP13.94□□□□□ -0.18
CSTF3-203ENST00000438862 ATXN2LQ8WWM7 1075 aaKnown RBP13.94□□□□□ -0.18
CSTF3-203ENST00000438862 SUCLG2Q96I99 432 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 CDH23Q9H251 3354 aa13.94□□□□□ -0.18
CSTF3-203ENST00000438862 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
CSTF3-203ENST00000438862 SALL1Q9NSC2 1324 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 C2orf72A6NCS6 295 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 DNM1LO00429 736 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 STK25O00506 426 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 VAMP4O75379 141 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 SLC5A1P13866 664 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 HOXA7P31268 230 aaPredicted RBP13.93□□□□□ -0.18
CSTF3-203ENST00000438862 RTP1P59025 263 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
CSTF3-203ENST00000438862 MORN1Q5T089 497 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 LPIN2Q92539 896 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 LPAR1Q92633 364 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
CSTF3-203ENST00000438862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSTF3-203ENST00000438862 AS3MTQ9HBK9 375 aa13.93□□□□□ -0.18
CSTF3-203ENST00000438862 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
CSTF3-203ENST00000438862 IL16Q14005 1332 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 CCL14Q16627 93 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 MFSD14CQ5VZR4 134 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 ZGPATQ8N5A5 531 aaKnown RBP13.92□□□□□ -0.18
CSTF3-203ENST00000438862 P2RX7Q99572 595 aaKnown RBP13.92□□□□□ -0.18
CSTF3-203ENST00000438862 APBA2Q99767 749 aa13.92□□□□□ -0.18
CSTF3-203ENST00000438862 BICC1Q9H694 974 aaKnown RBP13.92□□□□□ -0.18
CSTF3-203ENST00000438862 ARIH1Q9Y4X5 557 aaPredicted RBP13.92□□□□□ -0.18
CSTF3-203ENST00000438862 UTYO14607 1347 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 GAKO14976 1311 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 NBPF7P0C2Y1 421 aaPredicted RBP13.91□□□□□ -0.18
CSTF3-203ENST00000438862 SLURP2P0DP57 97 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 GPR142Q7Z601 462 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 PLEKHH3Q7Z736 793 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 WWC1Q8IX03 1113 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 GTF3C2Q8WUA4 911 aaPredicted RBP13.91□□□□□ -0.18
CSTF3-203ENST00000438862 BADQ92934 168 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 DDX20Q9UHI6 824 aaKnown RBP13.91□□□□□ -0.18
CSTF3-203ENST00000438862 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 ATP11BQ9Y2G3 1177 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 RFX7Q2KHR2 1363 aa13.91□□□□□ -0.18
CSTF3-203ENST00000438862 SEMA3EO15041 775 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 CAP2P40123 477 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 HERVK_113P62684 666 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 PICALMQ13492 652 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 GRIN2CQ14957 1233 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms