RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
LINC00028-201ENST00000435497 MAPKAPK5Q8IW41 473 aa16.72■□□□□ 0.27
LINC00028-201ENST00000435497 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
LINC00028-201ENST00000435497 CYP2E1P05181 493 aaPredicted RBP16.71■□□□□ 0.27
LINC00028-201ENST00000435497 ASNSP08243 561 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 HERVK_113P62684 666 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
LINC00028-201ENST00000435497 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 USP6NLQ92738 828 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 DBNDD2Q9BQY9 259 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 C11orf49Q9H6J7 331 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 PALD1Q9ULE6 856 aa16.71■□□□□ 0.27
LINC00028-201ENST00000435497 FLT1P17948 1338 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 DDX60LQ5H9U9 1706 aaKnown RBP16.7■□□□□ 0.26
LINC00028-201ENST00000435497 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 BCAR3O75815 825 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 GDF11O95390 407 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 BAG3O95817 575 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 XRCC5P13010 732 aaKnown RBP16.7■□□□□ 0.26
LINC00028-201ENST00000435497 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
LINC00028-201ENST00000435497 SYN1P17600 705 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 NOL10Q9BSC4 688 aaKnown RBP16.7■□□□□ 0.26
LINC00028-201ENST00000435497 PORCNQ9H237 461 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 EMILIN3Q9NT22 766 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 PFASO15067 1338 aa16.7■□□□□ 0.26
LINC00028-201ENST00000435497 FOCADQ5VW36 1801 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 DLL1O00548 723 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 PLCG2P16885 1265 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 MAGEA10P43363 369 aaPredicted RBP16.69■□□□□ 0.26
LINC00028-201ENST00000435497 CACNB2Q08289 660 aaPredicted RBP16.69■□□□□ 0.26
LINC00028-201ENST00000435497 POLA2Q14181 598 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 TNNI3KQ59H18 835 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 ATF7IPQ6VMQ6 1270 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 FPGT-TNNI3KV9GXZ4 949 aa16.69■□□□□ 0.26
LINC00028-201ENST00000435497 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
LINC00028-201ENST00000435497 ZAP70P43403 619 aa16.68■□□□□ 0.26
LINC00028-201ENST00000435497 ERVK-9P63128 1117 aa16.68■□□□□ 0.26
LINC00028-201ENST00000435497 ERVK-24P63145 666 aa16.68■□□□□ 0.26
LINC00028-201ENST00000435497 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
LINC00028-201ENST00000435497 CCL14Q16627 93 aa16.68■□□□□ 0.26
LINC00028-201ENST00000435497 MORN1Q5T089 497 aa16.68■□□□□ 0.26
LINC00028-201ENST00000435497 LHX8Q68G74 356 aa16.68■□□□□ 0.26
LINC00028-201ENST00000435497 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
LINC00028-201ENST00000435497 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
LINC00028-201ENST00000435497 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
LINC00028-201ENST00000435497 COL6A1P12109 1028 aa16.67■□□□□ 0.26
LINC00028-201ENST00000435497 CCND3P30281 292 aaPredicted RBP16.67■□□□□ 0.26
LINC00028-201ENST00000435497 MAPK4P31152 587 aa16.67■□□□□ 0.26
LINC00028-201ENST00000435497 CCDC158Q5M9N0 1113 aa16.67■□□□□ 0.26
LINC00028-201ENST00000435497 CRACR2BQ8N4Y2 399 aaPredicted RBP16.67■□□□□ 0.26
LINC00028-201ENST00000435497 SSH3Q8TE77 659 aa16.67■□□□□ 0.26
LINC00028-201ENST00000435497 SOCS4Q8WXH5 440 aa16.67■□□□□ 0.26
LINC00028-201ENST00000435497 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
LINC00028-201ENST00000435497 ZNF512BQ96KM6 892 aaPredicted RBP16.67■□□□□ 0.26
LINC00028-201ENST00000435497 CUL9Q8IWT3 2517 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 CNMDO75829 334 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 LRIT3Q3SXY7 679 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 Q7L0L9 218 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 GPR142Q7Z601 462 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
LINC00028-201ENST00000435497 MAST2Q6P0Q8 1798 aa16.65■□□□□ 0.26
LINC00028-201ENST00000435497 GH2P01242 217 aa16.65■□□□□ 0.26
LINC00028-201ENST00000435497 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
LINC00028-201ENST00000435497 USP17L2Q6R6M4 530 aa16.65■□□□□ 0.26
LINC00028-201ENST00000435497 PLEKHH3Q7Z736 793 aa16.65■□□□□ 0.26
LINC00028-201ENST00000435497 TRMT44Q8IYL2 757 aaKnown RBP16.65■□□□□ 0.26
LINC00028-201ENST00000435497 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
LINC00028-201ENST00000435497 MYH1P12882 1939 aa16.64■□□□□ 0.26
LINC00028-201ENST00000435497 CYP7A1P22680 504 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 RGS2P41220 211 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 LRRC26Q2I0M4 334 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 TATDN1Q6P1N9 297 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 TDHQ8IZJ6 230 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 DEFB123Q8N688 67 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 TLR7Q9NYK1 1049 aaKnown RBP16.64■□□□□ 0.25
LINC00028-201ENST00000435497 DBNLQ9UJU6 430 aaKnown RBP16.64■□□□□ 0.25
LINC00028-201ENST00000435497 DNAH12Q6ZR08 3092 aa16.64■□□□□ 0.25
LINC00028-201ENST00000435497 IGSF3O75054 1194 aa16.63■□□□□ 0.25
LINC00028-201ENST00000435497 SURF6O75683 361 aaKnown RBP16.63■□□□□ 0.25
LINC00028-201ENST00000435497 HLA-DOAP06340 250 aa16.63■□□□□ 0.25
LINC00028-201ENST00000435497 MAP2K5Q13163 448 aa16.63■□□□□ 0.25
LINC00028-201ENST00000435497 GTF3C2Q8WUA4 911 aaPredicted RBP16.63■□□□□ 0.25
LINC00028-201ENST00000435497 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
LINC00028-201ENST00000435497 CCDC8Q9H0W5 538 aaPredicted RBP16.63■□□□□ 0.25
LINC00028-201ENST00000435497 MTMR10Q9NXD2 777 aa16.63■□□□□ 0.25
LINC00028-201ENST00000435497 FLRT1Q9NZU1 646 aa16.63■□□□□ 0.25
LINC00028-201ENST00000435497 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
LINC00028-201ENST00000435497 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms