RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 GSCP56915 257 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 INHBEP58166 350 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 MAP7Q14244 749 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 ACAP1Q15027 740 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 COLGALT2Q8IYK4 626 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 RBM17Q96I25 401 aaKnown RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 GLT8D2Q9H1C3 349 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 DNAJC25Q9H1X3 360 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 SNRKQ9NRH2 765 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 PRKAB1Q9Y478 270 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 IGF1RP08069 1367 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 GOLGA6L9A6NEM1 432 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 DIAPH2O60879 1101 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 SLC16A2P36021 539 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 BPIFB3P59826 476 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 PDE4BQ07343 736 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 ZC3H12BQ5HYM0 836 aaKnown RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 TAOK1Q7L7X3 1001 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 STON2Q8WXE9 905 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 RGL1Q9NZL6 768 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 TSR3Q9UJK0 312 aaKnown RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 ZBTB21Q9ULJ3 1066 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 ROCK1Q13464 1354 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 EIF3CLB5ME19 914 aaKnown RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 GOLGA8MH3BSY2 632 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 STAM2O75886 525 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 RNF8O76064 485 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 GLULP15104 373 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 NFIAQ12857 509 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 KIRREL3Q8IZU9 778 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 TIFAQ96CG3 184 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 GCC1Q96CN9 775 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 ZNF496Q96IT1 587 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 EIF3CQ99613 913 aaKnown RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 CFDP1Q9UEE9 299 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-203ENST00000430976 TAGLN3Q9UI15 199 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 ZBED9Q6R2W3 1325 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 PAHP00439 452 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 TOP1P11387 765 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 HCLS1P14317 486 aaPredicted RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 EZRP15311 586 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 PTGS2P35354 604 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 CEP78Q5JTW2 689 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 CATSPER4Q7RTX7 472 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 TMEM87AQ8NBN3 555 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 KIF1BPQ96EK5 621 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 UQCC2Q9BRT2 126 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 MMTAG2Q9BU76 263 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 MOSPD1Q9UJG1 213 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 BRD4O60885 1362 aaPredicted RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 M0R2C6 588 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 LGR5O75473 907 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 SEC31AO94979 1220 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 HARSP12081 509 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 SKIV2L2P42285 1042 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 PLA2G4AP47712 749 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 CEP135Q66GS9 1140 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 CAVIN1Q6NZI2 390 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 ISLR2Q6UXK2 745 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 FCHSD1Q86WN1 690 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 LILRB2Q8N423 598 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 SELENOSQ9BQE4 189 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 MTMR12Q9C0I1 747 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 ZNF277Q9NRM2 450 aaPredicted RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 EIF2AK3Q9NZJ5 1116 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 TBX22Q9Y458 520 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 SPO11Q9Y5K1 396 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 PRPF40AO75400 957 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 PDHA1P08559 390 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 EIF2S2P20042 333 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 PDE6CP51160 858 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 TPD52P55327 224 aaPredicted RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 EXOSC9Q06265 439 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 SLC30A9Q6PML9 568 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 RUFY3Q7L099 469 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 APPL2Q8NEU8 664 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 PPHLN1Q8NEY8 458 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 CACTINQ8WUQ7 758 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 TSNARE1Q96NA8 513 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 RUNDC3BQ96NL0 473 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 BARD1Q99728 777 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 XPO7Q9UIA9 1087 aaKnown RBP6□□□□□ -1.45
PTPN4-203ENST00000430976 CEP131Q9UPN4 1083 aa6□□□□□ -1.45
PTPN4-203ENST00000430976 ATP8B1O43520 1251 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 FOXD2O60548 495 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-203ENST00000430976 REC8O95072 547 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 IVLP07476 585 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 PSMD7P51665 324 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 AP1B1Q10567 949 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 GIMAP8Q8ND71 665 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-203ENST00000430976 NOC3LQ8WTT2 800 aaKnown RBP5.99□□□□□ -1.45
PTPN4-203ENST00000430976 TBC1D5Q92609 795 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 TSG101Q99816 390 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 CCT7Q99832 543 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 PARD6BQ9BYG5 372 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 RRN3Q9NYV6 651 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 LCMT1Q9UIC8 334 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 IQCA1LA6NCM1 817 aa5.99□□□□□ -1.45
PTPN4-203ENST00000430976 C19orf81C9J6K1 198 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms