RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
BX088651.4-202ENST00000428895 TM4SF4P48230 202 aa15.38■□□□□ 0.05
BX088651.4-202ENST00000428895 GABPAQ06546 454 aa15.38■□□□□ 0.05
BX088651.4-202ENST00000428895 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
BX088651.4-202ENST00000428895 SLC44A5Q8NCS7 719 aa15.38■□□□□ 0.05
BX088651.4-202ENST00000428895 ESYT1Q9BSJ8 1104 aa15.38■□□□□ 0.05
BX088651.4-202ENST00000428895 CTNND1O60716 968 aaKnown RBP15.37■□□□□ 0.05
BX088651.4-202ENST00000428895 ZBTB48P10074 688 aaPredicted RBP15.37■□□□□ 0.05
BX088651.4-202ENST00000428895 MKRN3Q13064 507 aaKnown RBP15.37■□□□□ 0.05
BX088651.4-202ENST00000428895 ALX1Q15699 326 aa15.37■□□□□ 0.05
BX088651.4-202ENST00000428895 SNCAIPQ9Y6H5 919 aa15.37■□□□□ 0.05
BX088651.4-202ENST00000428895 TRPA1O75762 1119 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 GDF11O95390 407 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 SHMT1P34896 483 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 CAP2P40123 477 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 CDK8P49336 464 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 PPARAQ07869 468 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 SREBF2Q12772 1141 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 CERKLQ49MI3 558 aaPredicted RBP15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 TATDN1Q6P1N9 297 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 C16orf86Q6ZW13 317 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 DSCC1Q9BVC3 393 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 PICK1Q9NRD5 415 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 PTPRFP10586 1907 aa15.36■□□□□ 0.05
BX088651.4-202ENST00000428895 PTH1RQ03431 593 aa15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 CTDSPL2Q05D32 466 aa15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 NOL9Q5SY16 702 aaKnown RBP15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 OPTNQ96CV9 577 aa15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 OTUD5Q96G74 571 aa15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 ROBO3Q96MS0 1386 aa15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 ZMYM6O95789 1325 aa15.35■□□□□ 0.05
BX088651.4-202ENST00000428895 SLC3A2P08195 630 aaKnown RBP15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 GJA5P36382 358 aa15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 HAND2P61296 217 aa15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 JAG1P78504 1218 aa15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 ERO1BQ86YB8 467 aa15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 CFHR5Q9BXR6 569 aa15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 MKNK2Q9HBH9 465 aa15.34■□□□□ 0.05
BX088651.4-202ENST00000428895 MANSC4A6NHS7 340 aaPredicted RBP15.33■□□□□ 0.05
BX088651.4-202ENST00000428895 MPHOSPH10O00566 681 aaKnown RBP15.33■□□□□ 0.05
BX088651.4-202ENST00000428895 PRDM1O75626 825 aa15.33■□□□□ 0.05
BX088651.4-202ENST00000428895 GH2P01242 217 aa15.33■□□□□ 0.05
BX088651.4-202ENST00000428895 PTPRAP18433 802 aa15.33■□□□□ 0.05
BX088651.4-202ENST00000428895 CCDC84Q86UT8 332 aaPredicted RBP15.33■□□□□ 0.05
BX088651.4-202ENST00000428895 ANO2Q9NQ90 1003 aa15.33■□□□□ 0.05
BX088651.4-202ENST00000428895 SPDYE5A6NIY4 337 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 ZNF213O14771 459 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 ASNSP08243 561 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 INHBEP58166 350 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 PDE4BQ07343 736 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 ABCB5Q2M3G0 1257 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 NOM1Q5C9Z4 860 aaKnown RBP15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 ZNF287Q9HBT7 754 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 CABP5Q9NP86 173 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 INCENPQ9NQS7 918 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 CTNNA3Q9UI47 895 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 ANAPC4Q9UJX5 808 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 ZBTB21Q9ULJ3 1066 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 ZHX2Q9Y6X8 837 aa15.33■□□□□ 0.04
BX088651.4-202ENST00000428895 MYH4Q9Y623 1939 aa15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 TESPA1A2RU30 521 aaPredicted RBP15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 AKR1B1P15121 316 aa15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 PPATQ06203 517 aa15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 RAB3GAP1Q15042 981 aa15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 IMMTQ16891 758 aaKnown RBP15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 LSG1Q9H089 658 aaKnown RBP15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 GREB1LQ9C091 1923 aaPredicted RBP15.32■□□□□ 0.04
BX088651.4-202ENST00000428895 USP17L5A8MUK1 530 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 IRF6O14896 467 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 ALDH1A1P00352 501 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 RASA1P20936 1047 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 PPIL2Q13356 520 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 ZNF444Q8N0Y2 327 aaPredicted RBP15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 MAP4K1Q92918 833 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 TOMM22Q9NS69 142 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 RBM8AQ9Y5S9 174 aaKnown RBP15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 TACC3Q9Y6A5 838 aa15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
BX088651.4-202ENST00000428895 CAPN15O75808 1086 aa15.3■□□□□ 0.04
BX088651.4-202ENST00000428895 SEPT2Q15019 361 aa15.3■□□□□ 0.04
BX088651.4-202ENST00000428895 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
BX088651.4-202ENST00000428895 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
BX088651.4-202ENST00000428895 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
BX088651.4-202ENST00000428895 NBPF3Q9H094 633 aa15.3■□□□□ 0.04
BX088651.4-202ENST00000428895 GINM1Q9NU53 330 aa15.3■□□□□ 0.04
BX088651.4-202ENST00000428895 TRIM75PA6NK02 468 aa15.29■□□□□ 0.04
BX088651.4-202ENST00000428895 IGF2BP3O00425 579 aaKnown RBP eCLIP15.29■□□□□ 0.04
BX088651.4-202ENST00000428895 TBC1D8O95759 1140 aa15.29■□□□□ 0.04
BX088651.4-202ENST00000428895 FAM47AQ5JRC9 791 aa15.29■□□□□ 0.04
BX088651.4-202ENST00000428895 RRP12Q5JTH9 1297 aaKnown RBP15.29■□□□□ 0.04
BX088651.4-202ENST00000428895 AKNAD1Q5T1N1 836 aa15.29■□□□□ 0.04
BX088651.4-202ENST00000428895 MFSD6Q6ZSS7 791 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms