RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SHMT1P34896 483 aa17.33■□□□□ 0.36
SGCE-204ENST00000428696 PPARAQ07869 468 aa17.33■□□□□ 0.36
SGCE-204ENST00000428696 METTL16Q86W50 562 aaKnown RBP17.33■□□□□ 0.36
SGCE-204ENST00000428696 ZNF444Q8N0Y2 327 aaPredicted RBP17.33■□□□□ 0.36
SGCE-204ENST00000428696 IL25Q9H293 177 aa17.33■□□□□ 0.36
SGCE-204ENST00000428696 SPDYE5A6NIY4 337 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 ZNF213O14771 459 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 FOXP2O15409 715 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 PTPRAP18433 802 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 GJA5P36382 358 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 MAP2K2P36507 400 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 JAG1P78504 1218 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 TATDN1Q6P1N9 297 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 ZNF287Q9HBT7 754 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 MYH1P12882 1939 aa17.32■□□□□ 0.36
SGCE-204ENST00000428696 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 IRF6O14896 467 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 SGSM2O43147 1006 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 ASNSP08243 561 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 PPATQ06203 517 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 GABPAQ06546 454 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 PDE4BQ07343 736 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 ALX1Q15699 326 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
SGCE-204ENST00000428696 NOL9Q5SY16 702 aaKnown RBP17.31■□□□□ 0.36
SGCE-204ENST00000428696 C16orf86Q6ZW13 317 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 ESYT1Q9BSJ8 1104 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 BEGAINQ9BUH8 593 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 INCENPQ9NQS7 918 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 RAD50Q92878 1312 aa17.31■□□□□ 0.36
SGCE-204ENST00000428696 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 ZBTB48P10074 688 aaPredicted RBP17.3■□□□□ 0.36
SGCE-204ENST00000428696 PTH1RQ03431 593 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 SPP2Q13103 211 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 CDK5RAP2Q96SN8 1893 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 BAZ2AQ9UIF9 1905 aaKnown RBP17.3■□□□□ 0.36
SGCE-204ENST00000428696 MANSC4A6NHS7 340 aaPredicted RBP17.3■□□□□ 0.36
SGCE-204ENST00000428696 AKR1B1P15121 316 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 GTF2A2P52657 109 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 PPIL2Q13356 520 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 SNAPC2Q13487 334 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 AS3MTQ9HBK9 375 aa17.3■□□□□ 0.36
SGCE-204ENST00000428696 NAV1Q8NEY1 1877 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 CCL15-CCL14A0A0B4J2E2 113 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
SGCE-204ENST00000428696 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
SGCE-204ENST00000428696 SREBF2Q12772 1141 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 SEPT2Q15019 361 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 ZYXQ15942 572 aaKnown RBP17.29■□□□□ 0.36
SGCE-204ENST00000428696 CCL15Q16663 113 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 IMMTQ16891 758 aaKnown RBP17.29■□□□□ 0.36
SGCE-204ENST00000428696 FAM47AQ5JRC9 791 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 ZNF280CQ8ND82 737 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 FEZ1Q99689 392 aa17.29■□□□□ 0.36
SGCE-204ENST00000428696 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
SGCE-204ENST00000428696 CETPP11597 493 aa17.28■□□□□ 0.36
SGCE-204ENST00000428696 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
SGCE-204ENST00000428696 AFG3L2Q9Y4W6 797 aa17.28■□□□□ 0.36
SGCE-204ENST00000428696 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
SGCE-204ENST00000428696 RAD21O60216 631 aa17.27■□□□□ 0.35
SGCE-204ENST00000428696 TSPY3P0CV98 308 aa17.27■□□□□ 0.35
SGCE-204ENST00000428696 TSPY8P0CW00 308 aa17.27■□□□□ 0.35
SGCE-204ENST00000428696 INHBEP58166 350 aa17.27■□□□□ 0.35
SGCE-204ENST00000428696 TFAP4Q01664 338 aa17.27■□□□□ 0.35
SGCE-204ENST00000428696 MFSD6Q6ZSS7 791 aa17.27■□□□□ 0.35
SGCE-204ENST00000428696 TMEM179Q6ZVK1 233 aa17.27■□□□□ 0.35
SGCE-204ENST00000428696 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 CXCL11O14625 94 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 TRPA1O75762 1119 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 RASA1P20936 1047 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 OTUD7BQ6GQQ9 843 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 CLEC10AQ8IUN9 316 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 GINM1Q9NU53 330 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 ANAPC4Q9UJX5 808 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 RBM8AQ9Y5S9 174 aaKnown RBP17.26■□□□□ 0.35
SGCE-204ENST00000428696 PCNTO95613 3336 aa17.26■□□□□ 0.35
SGCE-204ENST00000428696 HMGCS2P54868 508 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 MTMR2Q13614 643 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 POTEHQ6S545 545 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 REM2Q8IYK8 340 aaPredicted RBP17.25■□□□□ 0.35
SGCE-204ENST00000428696 BRI3BPQ8WY22 251 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 MS4A4AQ96JQ5 239 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 RNF41Q9H4P4 317 aaPredicted RBP17.25■□□□□ 0.35
SGCE-204ENST00000428696 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 TSKSQ9UJT2 592 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
SGCE-204ENST00000428696 USP17L10C9JJH3 530 aa17.24■□□□□ 0.35
SGCE-204ENST00000428696 TM4SF4P48230 202 aa17.24■□□□□ 0.35
SGCE-204ENST00000428696 DGKZQ13574 1117 aa17.24■□□□□ 0.35
SGCE-204ENST00000428696 IFNL1Q8IU54 200 aa17.24■□□□□ 0.35
SGCE-204ENST00000428696 ACER1Q8TDN7 264 aa17.24■□□□□ 0.35
SGCE-204ENST00000428696 MAP4K1Q92918 833 aa17.24■□□□□ 0.35
SGCE-204ENST00000428696 GUCY1A2P33402 732 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms