RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 EDC3Q96F86 508 aaKnown RBP9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 PARK7Q99497 189 aaKnown RBP9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 MFRPQ9BY79 579 aa9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 DHX36Q9H2U1 1008 aaKnown RBP9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 ANTXR1Q9H6X2 564 aa9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 PIH1D3Q9NQM4 214 aaKnown RBP9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 AATFQ9NY61 560 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 PI4KBQ9UBF8 816 aa9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 CPA4Q9UI42 421 aa9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 HERC5Q9UII4 1024 aaKnown RBP9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 SLC45A1Q9Y2W3 748 aa9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 MKI67P46013 3256 aaKnown RBP9.99□□□□□ -0.81
TRIM43CP-201ENST00000422468 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 HMMRO75330 724 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 PRMT2P55345 433 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 SLC9C1Q4G0N8 1177 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 TMED8Q6PL24 325 aaPredicted RBP9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 GADL1Q6ZQY3 521 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 NBPF11Q86T75 865 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 AACSQ86V21 672 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 RHPN1Q8TCX5 695 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 TGFBRAP1Q8WUH2 860 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 ZNF333Q96JL9 665 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 TRIM47Q96LD4 638 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 TBC1D2Q9BYX2 928 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 ARHGAP39Q9C0H5 1083 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 CHMP4BQ9H444 224 aaKnown RBP9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 PTCH2Q9Y6C5 1203 aa9.98□□□□□ -0.81
TRIM43CP-201ENST00000422468 POTEFA5A3E0 1075 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 APBB1O00213 710 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 IDH1O75874 414 aaKnown RBP9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 CYP2C8P10632 490 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 BCRP11274 1271 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 CYP7A1P22680 504 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 CAP2P40123 477 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 PSMC4P43686 418 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 IRX6P78412 446 aaPredicted RBP9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 TSHZ3Q63HK5 1081 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 METTL16Q86W50 562 aaKnown RBP9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 CERS3Q8IU89 383 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 MAPKAPK5Q8IW41 473 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 FLT1P17948 1338 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 SALL3Q9BXA9 1300 aa9.97□□□□□ -0.81
TRIM43CP-201ENST00000422468 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 SLC34A2O95436 690 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 FMNL1O95466 1100 aaPredicted RBP9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 IGHDP01880 384 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 HOXD10P28358 340 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 CTGFP29279 349 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 DYNLL1P63167 89 aaKnown RBP9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 MAP3K12Q12852 859 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 SPP2Q13103 211 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 RRP1BQ14684 758 aaKnown RBP9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 FOXP4Q8IVH2 680 aaPredicted RBP9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 CLASRPQ8N2M8 674 aaKnown RBP9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 MAGEB6Q8N7X4 407 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 ZNF280CQ8ND82 737 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 SRRDQ9UH36 339 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 PALD1Q9ULE6 856 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 AGTPBP1Q9UPW5 1226 aa9.96□□□□□ -0.82
TRIM43CP-201ENST00000422468 MYH7P12883 1935 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 SMIM22K7EJ46 135 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 RAB11FIP3O75154 756 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 OSBPP22059 807 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 TTF1Q15361 905 aaPredicted RBP9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 CRACR2BQ8N4Y2 399 aaPredicted RBP9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 SH3TC2Q8TF17 1288 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 TRIM34Q9BYJ4 488 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 DCTPP1Q9H773 170 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 DNAJC18Q9H819 358 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 AS3MTQ9HBK9 375 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 SAP30BPQ9UHR5 308 aaKnown RBP9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 PNMA3Q9UL41 463 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 NAV1Q8NEY1 1877 aa9.95□□□□□ -0.82
TRIM43CP-201ENST00000422468 DOCK3Q8IZD9 2030 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 MYPNQ86TC9 1320 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 ASNSP08243 561 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 IFIT2P09913 472 aaKnown RBP9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 EN2P19622 333 aaPredicted RBP9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 USP5P45974 858 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 FCGRTP55899 365 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 PABPC4Q13310 644 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 SH3D19Q5HYK7 790 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 TREML2Q5T2D2 321 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 PRPF38BQ5VTL8 546 aaKnown RBP9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 MIGA1Q8NAN2 632 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 RAET1EQ8TD07 263 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 SMCR8Q8TEV9 937 aaPredicted RBP9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 WDR18Q9BV38 432 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 GINM1Q9NU53 330 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 WDR70Q9NW82 654 aa9.94□□□□□ -0.82
TRIM43CP-201ENST00000422468 GRK4P32298 578 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms