RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SMARCE1Q969G3 411 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 VPS54Q9P1Q0 977 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 NHSL1Q5SYE7 1610 aa18.08■□□□□ 0.49
CDH1-202ENST00000422392 VWA3AA6NCI4 1184 aa18.08■□□□□ 0.49
CDH1-202ENST00000422392 KRT222Q8N1A0 295 aa18.08■□□□□ 0.49
CDH1-202ENST00000422392 UBAC1Q9BSL1 405 aa18.08■□□□□ 0.49
CDH1-202ENST00000422392 PPP2R2CQ9Y2T4 447 aa18.08■□□□□ 0.49
CDH1-202ENST00000422392 A0A087X0B3 334 aa18.08■□□□□ 0.48
CDH1-202ENST00000422392 CYP7A1P22680 504 aa18.08■□□□□ 0.48
CDH1-202ENST00000422392 CLCN6P51797 869 aa18.08■□□□□ 0.48
CDH1-202ENST00000422392 TOGARAM2Q6ZUX3 1019 aa18.08■□□□□ 0.48
CDH1-202ENST00000422392 EPSTI1Q96J88 318 aa18.08■□□□□ 0.48
CDH1-202ENST00000422392 TNKSO95271 1327 aa18.08■□□□□ 0.48
CDH1-202ENST00000422392 WNT7AO00755 349 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 ACTN4O43707 911 aaKnown RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 H2AFXP16104 143 aaPredicted RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 AFMP43652 599 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 SARSP49591 514 aaKnown RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 MORC3Q14149 939 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 ZNF771Q7L3S4 317 aaPredicted RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 TC2NQ8N9U0 490 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 DHX58Q96C10 678 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 BAG1Q99933 345 aaPredicted RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 EPC1Q9H2F5 836 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 ZNF18P17022 549 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 CHRNDQ07001 517 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 TBX2Q13207 712 aaPredicted RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 DHX8Q14562 1220 aaKnown RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 NOM1Q5C9Z4 860 aaKnown RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 DESI2Q9BSY9 194 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 HOOK1Q9UJC3 728 aaKnown RBP18.07■□□□□ 0.48
CDH1-202ENST00000422392 PNPLA7Q6ZV29 1317 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 PHLPP2Q6ZVD8 1323 aa18.07■□□□□ 0.48
CDH1-202ENST00000422392 KLHL10Q6JEL2 608 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 WDR24Q96S15 920 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 CARD6Q9BX69 1037 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 SRPRBQ9Y5M8 271 aaKnown RBP18.06■□□□□ 0.48
CDH1-202ENST00000422392 NID2Q14112 1375 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 ARHGAP6O43182 974 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 GYG1P46976 350 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
CDH1-202ENST00000422392 STX17P56962 302 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 NT5DC1Q5TFE4 455 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 PARP3Q9Y6F1 533 aa18.06■□□□□ 0.48
CDH1-202ENST00000422392 EXOC5O00471 708 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 CCP110O43303 1012 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 SLFN14P0C7P3 912 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 GNAT2P19087 354 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 IGHMBP2P38935 993 aaKnown RBP18.05■□□□□ 0.48
CDH1-202ENST00000422392 EVX2Q03828 476 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 SMYD4Q8IYR2 804 aaPredicted RBP18.05■□□□□ 0.48
CDH1-202ENST00000422392 RAI14Q9P0K7 980 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 PLEKHA8P1O95397 391 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 MTF1Q14872 753 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 SEC23AQ15436 765 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 SPECC1LQ69YQ0 1117 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
CDH1-202ENST00000422392 MLKLQ8NB16 471 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 ENOX1Q8TC92 643 aaKnown RBP18.05■□□□□ 0.48
CDH1-202ENST00000422392 STAMQ92783 540 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
CDH1-202ENST00000422392 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
CDH1-202ENST00000422392 CCDC196A0A1B0GTZ2 297 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 TEX33O43247 280 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 COBLO75128 1261 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 DYNLL1P63167 89 aaKnown RBP18.04■□□□□ 0.48
CDH1-202ENST00000422392 PKN1Q16512 942 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
CDH1-202ENST00000422392 MNS1Q8NEH6 495 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 FAM53CQ9NYF3 392 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDH1-202ENST00000422392 MYH8P13535 1937 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 CRKLP46109 303 aaKnown RBP18.04■□□□□ 0.48
CDH1-202ENST00000422392 GNG11P61952 73 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 CCDC152Q4G0S7 254 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 UBXN4Q92575 508 aa18.04■□□□□ 0.48
CDH1-202ENST00000422392 PLCH1Q4KWH8 1693 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 MYH13Q9UKX3 1938 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 ZSCAN12O43309 604 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 CD44P16070 742 aaKnown RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 RNF41Q9H4P4 317 aaPredicted RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 V9GY48 417 aaPredicted RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 PHLPP1O60346 1717 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 DOT1LQ8TEK3 1739 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 DISP2A7MBM2 1401 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 MAGEB6P1A0A0J9YX57 407 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 AKAP17AQ02040 695 aaKnown RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 GABPB1Q06547 395 aaPredicted RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 KARSQ15046 597 aaKnown RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 ELOA2Q8IYF1 753 aaPredicted RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 TMTC2Q8N394 836 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 CPLX3Q8WVH0 158 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 IRX2Q9BZI1 471 aaPredicted RBP18.03■□□□□ 0.48
CDH1-202ENST00000422392 FHOD1Q9Y613 1164 aa18.03■□□□□ 0.48
CDH1-202ENST00000422392 MYO1BO43795 1136 aa18.02■□□□□ 0.48
CDH1-202ENST00000422392 KIF20AO95235 890 aa18.02■□□□□ 0.48
CDH1-202ENST00000422392 ZNF579Q8NAF0 562 aaKnown RBP18.02■□□□□ 0.48
CDH1-202ENST00000422392 SYMPKQ92797 1274 aaKnown RBP18.02■□□□□ 0.48
CDH1-202ENST00000422392 CICQ96RK0 1608 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms