RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 HERC5Q9UII4 1024 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 VCANP13611 3396 aa12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 GSTO1P78417 241 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 MTMR2Q13614 643 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 PI16Q6UXB8 463 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 MEIS3Q99687 375 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 AS3MTQ9HBK9 375 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 TXNRD2Q9NNW7 524 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 HDAC5Q9UQL6 1122 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 LAMA2P24043 3122 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-202ENST00000420009 LDHCP07864 332 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 CYP2B6P20813 491 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 BACE1P56817 501 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 TFCP2Q12800 502 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 MTX1Q13505 466 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 SPATA5Q8NB90 893 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 USP6NLQ92738 828 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 UBE2OQ9C0C9 1292 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
TNFAIP3-202ENST00000420009 EYSQ5T1H1 3165 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 PEX10O60683 326 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 ASNSP08243 561 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 ARID4AP29374 1257 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 HERVK_113P62684 666 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 JAG1P78504 1218 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 METTL16Q86W50 562 aaKnown RBP12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 GPRC5AQ8NFJ5 357 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 PI4KBQ9UBF8 816 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 MAST2Q6P0Q8 1798 aa12.6□□□□□ -0.39
TNFAIP3-202ENST00000420009 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 SRGAP3O43295 1099 aa12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 MAPK4P31152 587 aa12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 CACNB2Q08289 660 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 LRRC26Q2I0M4 334 aa12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 SH3RF3Q8TEJ3 882 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 DHX36Q9H2U1 1008 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 RBPJLQ9UBG7 517 aa12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 NOB1Q9ULX3 412 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-202ENST00000420009 C19orf81C9J6K1 198 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 MCAMP43121 646 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 ERVK-24P63145 666 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 PDE3AQ14432 1141 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 MORN1Q5T089 497 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 GTF3C2Q8WUA4 911 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 APBA2Q99767 749 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 PORCNQ9H237 461 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 CDH23Q9H251 3354 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 SPTBN5Q9NRC6 3674 aaKnown RBP12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 GINM1Q9NU53 330 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 DNAH12Q6ZR08 3092 aa12.58□□□□□ -0.4
TNFAIP3-202ENST00000420009 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 RGS2P41220 211 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 CCL14Q16627 93 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 Q3C1V9 767 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 GPR142Q7Z601 462 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 NEUROD6Q96NK8 337 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 FRMPD3Q5JV73 1810 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 FLT1P17948 1338 aa12.57□□□□□ -0.4
TNFAIP3-202ENST00000420009 POTEMA6NI47 508 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 GNAI3P08754 354 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 PPP4CP60510 307 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 ASTLQ6HA08 431 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 PLEKHH3Q7Z736 793 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 GUCD1Q96NT3 240 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 EMILIN3Q9NT22 766 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 AATFQ9NY61 560 aaKnown RBP eCLIP12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
TNFAIP3-202ENST00000420009 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 GDF11O95390 407 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 BAG3O95817 575 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 PLCG2P16885 1265 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms