RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 HCN2Q9UL51 889 aa8.9□□□□□ -0.98
EPHA4-205ENST00000419964 SNRPA1P09661 255 aaKnown RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 UBTFL1P0CB47 393 aaPredicted RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 EIF2S2P20042 333 aaKnown RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 CABP4P57796 275 aa8.89□□□□□ -0.99
EPHA4-205ENST00000419964 DSC3Q14574 896 aa8.89□□□□□ -0.99
EPHA4-205ENST00000419964 CHRNA2Q15822 529 aa8.89□□□□□ -0.99
EPHA4-205ENST00000419964 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 DNAAF4Q8WXU2 420 aa8.89□□□□□ -0.99
EPHA4-205ENST00000419964 FMNL2Q96PY5 1086 aa8.89□□□□□ -0.99
EPHA4-205ENST00000419964 SLC30A3Q99726 388 aa8.89□□□□□ -0.99
EPHA4-205ENST00000419964 DDX21Q9NR30 783 aaKnown RBP eCLIP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 COL22A1Q8NFW1 1626 aaPredicted RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 COL14A1Q05707 1796 aaKnown RBP8.89□□□□□ -0.99
EPHA4-205ENST00000419964 RAB11FIP3O75154 756 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 RARAP10276 462 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 TARSP26639 723 aaKnown RBP8.88□□□□□ -0.99
EPHA4-205ENST00000419964 ATP8B2P98198 1209 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 NEXNQ0ZGT2 675 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 GRIN2CQ14957 1233 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 KSR2Q6VAB6 950 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 G2E3Q7L622 706 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 KRT25Q7Z3Z0 450 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 GPR161Q8N6U8 529 aaKnown RBP8.88□□□□□ -0.99
EPHA4-205ENST00000419964 SNX29Q8TEQ0 813 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 BHMTQ93088 406 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 MEIS3Q99687 375 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 LNPKQ9C0E8 428 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 ABI2Q9NYB9 513 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-205ENST00000419964 CHPF2Q9P2E5 772 aa8.88□□□□□ -0.99
EPHA4-205ENST00000419964 KDM6AO15550 1401 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-205ENST00000419964 TNFRSF21O75509 655 aa8.87□□□□□ -0.99
EPHA4-205ENST00000419964 MAP3K6O95382 1288 aa8.87□□□□□ -0.99
EPHA4-205ENST00000419964 NFKB1P19838 968 aa8.87□□□□□ -0.99
EPHA4-205ENST00000419964 FMR1Q06787 632 aaKnown RBP eCLIP8.87□□□□□ -0.99
EPHA4-205ENST00000419964 NFX1Q12986 1120 aaKnown RBP8.87□□□□□ -0.99
EPHA4-205ENST00000419964 GAS6Q14393 721 aa8.87□□□□□ -0.99
EPHA4-205ENST00000419964 SIRT2Q8IXJ6 389 aa8.87□□□□□ -0.99
EPHA4-205ENST00000419964 TMEM63CQ9P1W3 806 aa8.87□□□□□ -0.99
EPHA4-205ENST00000419964 ROBO1Q9Y6N7 1651 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 PI4KAP2A4QPH2 592 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 F6X3S4 739 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 CYP27B1O15528 508 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 TOM1O60784 492 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 PHACTR2O75167 634 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 MAP2K3P46734 347 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 FGD1P98174 961 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 EAPPQ56P03 285 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-205ENST00000419964 BEND3Q5T5X7 828 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 ZNF468Q5VIY5 522 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-205ENST00000419964 PI4KAP1Q8N8J0 262 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 LINS1Q8NG48 757 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 ANP32EQ9BTT0 268 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 COL25A1Q9BXS0 654 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-205ENST00000419964 TEX13AQ9BXU3 409 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-205ENST00000419964 LRRCC1Q9C099 1032 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 DNAJC25Q9H1X3 360 aa8.86□□□□□ -0.99
EPHA4-205ENST00000419964 AVENQ9NQS1 362 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-205ENST00000419964 AOX1Q06278 1338 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 LTBP4Q8N2S1 1624 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 C2CD2LO14523 706 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 CDC45O75419 566 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 P4HBP07237 508 aaKnown RBP8.85□□□□□ -0.99
EPHA4-205ENST00000419964 MAPK8P45983 427 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 RAB44Q7Z6P3 723 aaPredicted RBP8.85□□□□□ -0.99
EPHA4-205ENST00000419964 SKAP1Q86WV1 359 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 ERC1Q8IUD2 1116 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 TBC1D32Q96NH3 1257 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 USP44Q9H0E7 712 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 PHAXQ9H814 394 aaKnown RBP8.85□□□□□ -0.99
EPHA4-205ENST00000419964 C9orf78Q9NZ63 289 aaPredicted RBP8.85□□□□□ -0.99
EPHA4-205ENST00000419964 ZFATQ9P243 1243 aa8.85□□□□□ -0.99
EPHA4-205ENST00000419964 THRAP3Q9Y2W1 955 aaKnown RBP8.85□□□□□ -0.99
EPHA4-205ENST00000419964 LAMB4A4D0S4 1761 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 MMP20O60882 483 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
EPHA4-205ENST00000419964 PSAPP07602 524 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 ATP2B2Q01814 1243 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 MTX1Q13505 466 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 SYT9Q86SS6 491 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 SSH3Q8TE77 659 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 FOXD4L4Q8WXT5 416 aaPredicted RBP8.84□□□□□ -0.99
EPHA4-205ENST00000419964 CSRNP1Q96S65 589 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 TLR7Q9NYK1 1049 aaKnown RBP8.84□□□□□ -0.99
EPHA4-205ENST00000419964 FOXD3Q9UJU5 478 aaPredicted RBP8.84□□□□□ -0.99
EPHA4-205ENST00000419964 MAP3K2Q9Y2U5 619 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 PLCH1Q4KWH8 1693 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 ADCY9O60503 1353 aa8.84□□□□□ -0.99
EPHA4-205ENST00000419964 LRP6O75581 1613 aa8.83□□□□□ -1
EPHA4-205ENST00000419964 UTYO14607 1347 aa8.83□□□□□ -1
EPHA4-205ENST00000419964 PHF20L1A8MW92 1017 aa8.83□□□□□ -1
EPHA4-205ENST00000419964 EIF1AYO14602 144 aaKnown RBP8.83□□□□□ -1
EPHA4-205ENST00000419964 KCNQ3O43525 872 aa8.83□□□□□ -1
EPHA4-205ENST00000419964 SIN3BO75182 1162 aa8.83□□□□□ -1
EPHA4-205ENST00000419964 ARAFP10398 606 aa8.83□□□□□ -1
EPHA4-205ENST00000419964 CES1P23141 567 aa8.83□□□□□ -1
EPHA4-205ENST00000419964 ORC1Q13415 861 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms