RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 VCANP13611 3396 aa20.23■□□□□ 0.83
CDC42EP1-202ENST00000415670 TFCP2Q12800 502 aa20.23■□□□□ 0.83
CDC42EP1-202ENST00000415670 UBE2OQ9C0C9 1292 aaKnown RBP20.23■□□□□ 0.83
CDC42EP1-202ENST00000415670 HMX1Q9NP08 348 aaPredicted RBP20.23■□□□□ 0.83
CDC42EP1-202ENST00000415670 DENND2AQ9ULE3 1009 aa20.23■□□□□ 0.83
CDC42EP1-202ENST00000415670 STXBP5LQ9Y2K9 1186 aa20.23■□□□□ 0.83
CDC42EP1-202ENST00000415670 RPTORQ8N122 1335 aa20.23■□□□□ 0.83
CDC42EP1-202ENST00000415670 SMARCA5O60264 1052 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 MDM2Q00987 491 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 LRIT3Q3SXY7 679 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 POTEEQ6S8J3 1075 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 PI16Q6UXB8 463 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 TBC1D9Q6ZT07 1266 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 CHD1LQ86WJ1 897 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 TDHQ8IZJ6 230 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 FAM161BQ96MY7 647 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 TXNRD2Q9NNW7 524 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 GPR108Q9NPR9 543 aa20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 GNL3LQ9NVN8 582 aaKnown RBP20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 ZBTB47Q9UFB7 747 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-202ENST00000415670 ATAD5Q96QE3 1844 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 MECOMQ03112 1051 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 LRRC26Q2I0M4 334 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 DZIP1Q86YF9 867 aaKnown RBP20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 LNPKQ9C0E8 428 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 IL1RAPL2Q9NP60 686 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 OGDHLQ9ULD0 1010 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 LOC285556D6RIA3 1793 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 PRUNE2Q8WUY3 3088 aa20.21■□□□□ 0.83
CDC42EP1-202ENST00000415670 CCND3P30281 292 aaPredicted RBP20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 CCL14Q16627 93 aa20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 Q3C1V9 767 aa20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 CLASRPQ8N2M8 674 aaKnown RBP20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 ZNF280CQ8ND82 737 aa20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 FAM163AQ96GL9 167 aaPredicted RBP20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 P2RX7Q99572 595 aaKnown RBP20.2■□□□□ 0.82
CDC42EP1-202ENST00000415670 GPR75-ASB3A0A0A6YYF3 556 aa20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 PRKAR2AP13861 404 aaKnown RBP20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 TNNI3KQ59H18 835 aa20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 GPR153Q6NV75 609 aa20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 GUCD1Q96NT3 240 aa20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 AKAP2Q9Y2D5 859 aa20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 FPGT-TNNI3KV9GXZ4 949 aa20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 MROH7-TTC4A0A0A0MT08 1334 aa20.19■□□□□ 0.82
CDC42EP1-202ENST00000415670 CACNB2Q08289 660 aaPredicted RBP20.18■□□□□ 0.82
CDC42EP1-202ENST00000415670 MAP3K21Q5TCX8 1036 aa20.18■□□□□ 0.82
CDC42EP1-202ENST00000415670 PROCA1Q8NCQ7 364 aaPredicted RBP20.18■□□□□ 0.82
CDC42EP1-202ENST00000415670 SEMA3EO15041 775 aa20.17■□□□□ 0.82
CDC42EP1-202ENST00000415670 TBC1D12O60347 775 aa20.17■□□□□ 0.82
CDC42EP1-202ENST00000415670 CAP2P40123 477 aa20.17■□□□□ 0.82
CDC42EP1-202ENST00000415670 LHX8Q68G74 356 aa20.17■□□□□ 0.82
CDC42EP1-202ENST00000415670 EAF2Q96CJ1 260 aaPredicted RBP20.17■□□□□ 0.82
CDC42EP1-202ENST00000415670 PNMA3Q9UL41 463 aa20.17■□□□□ 0.82
CDC42EP1-202ENST00000415670 A0A1B0GUL7 405 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 COL6A1P12109 1028 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 GCLCP48506 637 aaPredicted RBP20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 AACSQ86V21 672 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 XAGE2Q96GT9 111 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 PORCNQ9H237 461 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 RBPJLQ9UBG7 517 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 NDUFB9Q9Y6M9 179 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 SIPA1L1O43166 1804 aa20.16■□□□□ 0.82
CDC42EP1-202ENST00000415670 PDE4AP27815 886 aa20.15■□□□□ 0.82
CDC42EP1-202ENST00000415670 MTMR2Q13614 643 aa20.15■□□□□ 0.82
CDC42EP1-202ENST00000415670 SH3RF3Q8TEJ3 882 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP1-202ENST00000415670 OSBPL5Q9H0X9 879 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP1-202ENST00000415670 HMG20BQ9P0W2 317 aa20.15■□□□□ 0.82
CDC42EP1-202ENST00000415670 MORF4L1Q9UBU8 362 aa20.15■□□□□ 0.82
CDC42EP1-202ENST00000415670 SALL3Q9BXA9 1300 aa20.14■□□□□ 0.81
CDC42EP1-202ENST00000415670 USP17L5A8MUK1 530 aa20.14■□□□□ 0.81
CDC42EP1-202ENST00000415670 IFIT2P09913 472 aaKnown RBP20.14■□□□□ 0.81
CDC42EP1-202ENST00000415670 SH3D19Q5HYK7 790 aa20.14■□□□□ 0.81
CDC42EP1-202ENST00000415670 ERICH6Q7L0X2 663 aa20.14■□□□□ 0.81
CDC42EP1-202ENST00000415670 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
CDC42EP1-202ENST00000415670 SPTBN5Q9NRC6 3674 aaKnown RBP20.14■□□□□ 0.81
CDC42EP1-202ENST00000415670 POTEB2H3BUK9 544 aa20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 CAPN2P17655 700 aa20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 USP6NLQ92738 828 aa20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 NSUN4Q96CB9 384 aaKnown RBP20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 NEUROD6Q96NK8 337 aa20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 CCDC8Q9H0W5 538 aaPredicted RBP20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 DNAJC18Q9H819 358 aa20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 FLRT1Q9NZU1 646 aa20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 DBNLQ9UJU6 430 aaKnown RBP20.13■□□□□ 0.81
CDC42EP1-202ENST00000415670 ZGPATQ8N5A5 531 aaKnown RBP20.12■□□□□ 0.81
CDC42EP1-202ENST00000415670 OTUD7AQ8TE49 926 aaPredicted RBP20.12■□□□□ 0.81
CDC42EP1-202ENST00000415670 DBNDD2Q9BQY9 259 aa20.12■□□□□ 0.81
CDC42EP1-202ENST00000415670 TLR7Q9NYK1 1049 aaKnown RBP20.12■□□□□ 0.81
CDC42EP1-202ENST00000415670 GDF11O95390 407 aa20.11■□□□□ 0.81
CDC42EP1-202ENST00000415670 HERVK_113P62684 666 aa20.11■□□□□ 0.81
CDC42EP1-202ENST00000415670 SKAP1Q86WV1 359 aa20.11■□□□□ 0.81
CDC42EP1-202ENST00000415670 NUDT12Q9BQG2 462 aa20.11■□□□□ 0.81
CDC42EP1-202ENST00000415670 MX1P20591 662 aa20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 IRX3P78415 501 aaPredicted RBP20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 MORN1Q5T089 497 aa20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 SPTY2D1Q68D10 685 aaPredicted RBP20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 PLEKHM2Q8IWE5 1019 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms