RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
RFFL-203ENST00000413582 CCL14Q16627 93 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 LHX8Q68G74 356 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 TRMT44Q8IYL2 757 aaKnown RBP11.82□□□□□ -0.52
RFFL-203ENST00000413582 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 NSUN4Q96CB9 384 aaKnown RBP11.82□□□□□ -0.52
RFFL-203ENST00000413582 XAGE2Q96GT9 111 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 APBA2Q99767 749 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 PORCNQ9H237 461 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 DNAJC18Q9H819 358 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
RFFL-203ENST00000413582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.82□□□□□ -0.52
RFFL-203ENST00000413582 ASNSP08243 561 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 MAPK4P31152 587 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 ERVK-9P63128 1117 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 ERVK-24P63145 666 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 GSTO1P78417 241 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 JAG1P78504 1218 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 SHROOM1Q2M3G4 852 aaPredicted RBP11.81□□□□□ -0.52
RFFL-203ENST00000413582 ALDH1L2Q3SY69 923 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 MORN1Q5T089 497 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 GPR142Q7Z601 462 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 FAM9BQ8IZU0 186 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 TMOD4Q9NZQ9 345 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
RFFL-203ENST00000413582 RLFQ13129 1914 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 SPTBN5Q9NRC6 3674 aaKnown RBP11.8□□□□□ -0.52
RFFL-203ENST00000413582 E9PSI1 815 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 LDHCP07864 332 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 RGS2P41220 211 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 TFCP2Q12800 502 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 Q3C1V9 767 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
RFFL-203ENST00000413582 MEIS3Q99687 375 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 SMC4Q9NTJ3 1288 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 PI4KBQ9UBF8 816 aa11.8□□□□□ -0.52
RFFL-203ENST00000413582 MYO5AQ9Y4I1 1855 aaKnown RBP11.79□□□□□ -0.52
RFFL-203ENST00000413582 C19orf81C9J6K1 198 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 ARID4AP29374 1257 aaPredicted RBP11.79□□□□□ -0.52
RFFL-203ENST00000413582 PLEKHH3Q7Z736 793 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
RFFL-203ENST00000413582 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
RFFL-203ENST00000413582 FAM161BQ96MY7 647 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 PAGR1Q9BTK6 254 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
RFFL-203ENST00000413582 RAI14Q9P0K7 980 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 ZBTB21Q9ULJ3 1066 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 CDH23Q9H251 3354 aa11.79□□□□□ -0.52
RFFL-203ENST00000413582 GDF11O95390 407 aa11.78□□□□□ -0.52
RFFL-203ENST00000413582 MCAMP43121 646 aa11.78□□□□□ -0.52
RFFL-203ENST00000413582 MAP2K5Q13163 448 aa11.78□□□□□ -0.52
RFFL-203ENST00000413582 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
RFFL-203ENST00000413582 FLT1P17948 1338 aa11.78□□□□□ -0.52
RFFL-203ENST00000413582 ZNF236Q9UL36 1845 aa11.77□□□□□ -0.52
RFFL-203ENST00000413582 USP17L10C9JJH3 530 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 SRGAP3O43295 1099 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 CNMDO75829 334 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 MTX1Q13505 466 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 ZNF697Q5TEC3 545 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 MAPKAPK5Q8IW41 473 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.53
RFFL-203ENST00000413582 LBHD1Q9BQE6 289 aaPredicted RBP11.77□□□□□ -0.53
RFFL-203ENST00000413582 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
RFFL-203ENST00000413582 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 GINM1Q9NU53 330 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 AATFQ9NY61 560 aaKnown RBP eCLIP11.77□□□□□ -0.53
RFFL-203ENST00000413582 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 DDX20Q9UHI6 824 aaKnown RBP11.77□□□□□ -0.53
RFFL-203ENST00000413582 MYH1P12882 1939 aa11.77□□□□□ -0.53
RFFL-203ENST00000413582 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
RFFL-203ENST00000413582 MFSD14CQ5VZR4 134 aa11.76□□□□□ -0.53
RFFL-203ENST00000413582 ADGRA1Q86SQ6 560 aa11.76□□□□□ -0.53
RFFL-203ENST00000413582 TGFBRAP1Q8WUH2 860 aa11.76□□□□□ -0.53
RFFL-203ENST00000413582 C12orf42Q96LP6 360 aa11.76□□□□□ -0.53
RFFL-203ENST00000413582 NEUROD6Q96NK8 337 aa11.76□□□□□ -0.53
RFFL-203ENST00000413582 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
RFFL-203ENST00000413582 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
RFFL-203ENST00000413582 LRP2BPQ9P2M1 347 aa11.76□□□□□ -0.53
RFFL-203ENST00000413582 NOB1Q9ULX3 412 aaKnown RBP11.76□□□□□ -0.53
RFFL-203ENST00000413582 RABGAP1Q9Y3P9 1069 aa11.76□□□□□ -0.53
RFFL-203ENST00000413582 DNM1LO00429 736 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 MSCO60682 206 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 HOXC6P09630 235 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 PLCG2P16885 1265 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 RTP1P59025 263 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 PPP4CP60510 307 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 GORABQ5T7V8 394 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 USP17L2Q6R6M4 530 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
RFFL-203ENST00000413582 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
RFFL-203ENST00000413582 LPAR1Q92633 364 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 CDX2Q99626 313 aaPredicted RBP11.75□□□□□ -0.53
RFFL-203ENST00000413582 PALD1Q9ULE6 856 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms