RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 MICU3Q86XE3 530 aa10.15□□□□□ -0.79
SIK3-202ENST00000413553 PLEKHA4Q9H4M7 779 aa10.15□□□□□ -0.79
SIK3-202ENST00000413553 CTAGE9A4FU28 777 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 ZNF213O14771 459 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
SIK3-202ENST00000413553 VSNL1P62760 191 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 CASP8Q14790 479 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 SKIDA1Q1XH10 827 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 CPLX2Q6PUV4 134 aaKnown RBP10.14□□□□□ -0.79
SIK3-202ENST00000413553 RAD9BQ6WBX8 426 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 FBXL16Q8N461 479 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 UBR2Q8IWV8 1755 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 DOT1LQ8TEK3 1739 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 CDKL5O76039 1030 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 IL6STP40189 918 aaPredicted RBP10.14□□□□□ -0.79
SIK3-202ENST00000413553 KLHL10Q6JEL2 608 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 GRAMD1CQ8IYS0 662 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 MSANTD4Q8NCY6 345 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
SIK3-202ENST00000413553 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.14□□□□□ -0.79
SIK3-202ENST00000413553 ACBD3Q9H3P7 528 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
SIK3-202ENST00000413553 L1RE1Q9UN81 338 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 LAMB4A4D0S4 1761 aa10.14□□□□□ -0.79
SIK3-202ENST00000413553 MAP3K15Q6ZN16 1313 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 CTAGE15A4D2H0 777 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 EIF3CLB5ME19 914 aaKnown RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 POLR2DO15514 142 aaKnown RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 CTAGE8P0CG41 777 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 ZNF18P17022 549 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 USP5P45974 858 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 ICE2Q659A1 982 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 ATG9AQ7Z3C6 839 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 CTAGE6Q86UF2 777 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 CTAGE4Q8IX94 777 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 SLC35F6Q8N357 371 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 IGSF22Q8N9C0 903 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 MLKLQ8NB16 471 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 MAP3K14Q99558 947 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 EIF3CQ99613 913 aaKnown RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 SERTAD1Q9UHV2 236 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 AKAP2Q9Y2D5 859 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 ECM29Q5VYK3 1845 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 ZMYM6O95789 1325 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 TEX33O43247 280 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 MAGEA9P43362 315 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 RBL2Q08999 1139 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 HLFQ16534 295 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 LRRC24Q50LG9 513 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 GIGYF2Q6Y7W6 1299 aaKnown RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 PTF1AQ7RTS3 328 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 RGS22Q8NE09 1264 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 FAM71BQ8TC56 605 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 ENOX1Q8TC92 643 aaKnown RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 FAM89AQ96GI7 184 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 CDC5LQ99459 802 aaKnown RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 FAM204AQ9H8W3 233 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 RAB21Q9UL25 225 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 ARFGEF2Q9Y6D5 1785 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 WNK3Q9BYP7 1800 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 IL15P40933 162 aaPredicted RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 ITPK1Q13572 414 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 NFXL1Q6ZNB6 911 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 CCDC85AQ96PX6 553 aaPredicted RBP10.13□□□□□ -0.79
SIK3-202ENST00000413553 PANX2Q96RD6 677 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 DENND2AQ9ULE3 1009 aa10.13□□□□□ -0.79
SIK3-202ENST00000413553 EP400Q96L91 3159 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 FOXP2O15409 715 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
SIK3-202ENST00000413553 STX17P56962 302 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 SLC9C2Q5TAH2 1124 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 MKRN1Q9UHC7 482 aaKnown RBP10.12□□□□□ -0.79
SIK3-202ENST00000413553 ANGEL1Q9UNK9 670 aaKnown RBP10.12□□□□□ -0.79
SIK3-202ENST00000413553 PAPPAQ13219 1627 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 FAM237AA0A1B0GTK4 181 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 AKAP17AQ02040 695 aaKnown RBP10.12□□□□□ -0.79
SIK3-202ENST00000413553 NR1I3Q14994 352 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 ACRBPQ8NEB7 543 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 MYL10Q9BUA6 226 aa10.12□□□□□ -0.79
SIK3-202ENST00000413553 H7C1W4 665 aa10.11□□□□□ -0.79
SIK3-202ENST00000413553 GRIN1Q05586 938 aa10.11□□□□□ -0.79
SIK3-202ENST00000413553 LRRC31Q6UY01 552 aa10.11□□□□□ -0.79
SIK3-202ENST00000413553 NAPGQ99747 312 aaPredicted RBP10.11□□□□□ -0.79
SIK3-202ENST00000413553 NAA15Q9BXJ9 866 aaKnown RBP10.11□□□□□ -0.79
SIK3-202ENST00000413553 PUS7LQ9H0K6 701 aaKnown RBP10.11□□□□□ -0.79
SIK3-202ENST00000413553 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.11□□□□□ -0.79
SIK3-202ENST00000413553 TRMT112Q9UI30 125 aaKnown RBP10.11□□□□□ -0.79
SIK3-202ENST00000413553 JRKLQ9Y4A0 524 aa10.11□□□□□ -0.79
SIK3-202ENST00000413553 GLI3P10071 1580 aa10.11□□□□□ -0.79
SIK3-202ENST00000413553 A0A1B0GTH6 734 aa10.11□□□□□ -0.79
SIK3-202ENST00000413553 LRRIQ3A6PVS8 624 aaPredicted RBP10.11□□□□□ -0.79
SIK3-202ENST00000413553 UBE2Q2LH0YL09 131 aa10.11□□□□□ -0.79
SIK3-202ENST00000413553 APPP05067 770 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms