RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 C12orf50Q8NA57 414 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-204ENST00000412061 NACC1Q96RE7 527 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 TM9SF2Q99805 663 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 ACTR10Q9NZ32 417 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 GMIPQ9P107 970 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 SIRPGQ9P1W8 387 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 CLSTN1O94985 981 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 TIAF1O95411 115 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 APBA3O96018 575 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 SERINC3Q13530 473 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 NFE2L2Q16236 605 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 OVOS1Q6IE37 1185 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 DYMQ7RTS9 669 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 JAZF1Q86VZ6 243 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 AGGF1Q8N302 714 aaeCLIP6.3□□□□□ -1.4
BRCA1-204ENST00000412061 C19orf47Q8N9M1 422 aaKnown RBP6.3□□□□□ -1.4
BRCA1-204ENST00000412061 KCT2Q8NC54 265 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 ZNF507Q8TCN5 953 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 LENG1Q96BZ8 264 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-204ENST00000412061 ANTXR1Q9H6X2 564 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 AKTIPQ9H8T0 292 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 PIDD1Q9HB75 910 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 USP21Q9UK80 565 aa6.3□□□□□ -1.4
BRCA1-204ENST00000412061 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 C9orf172C9J069 976 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 DRD2P14416 443 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 GUCY2CP25092 1073 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 CASP7P55210 303 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 NRG1Q02297 640 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-204ENST00000412061 TTLL4Q14679 1199 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 PPP2R5EQ16537 467 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 NLRC3Q7RTR2 1065 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 HID1Q8IV36 788 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 TAB3Q8N5C8 712 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-204ENST00000412061 MKL1Q969V6 931 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 ACSF2Q96CM8 615 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-204ENST00000412061 CEP41Q9BYV8 373 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 GSX1Q9H4S2 264 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-204ENST00000412061 METTL14Q9HCE5 456 aaKnown RBP6.29□□□□□ -1.4
BRCA1-204ENST00000412061 KLHL3Q9UH77 587 aa6.29□□□□□ -1.4
BRCA1-204ENST00000412061 SART1O43290 800 aaKnown RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 HCLS1P14317 486 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 NME1P15531 152 aaKnown RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 NTF4P34130 210 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 ASPAP45381 313 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 YARSP54577 528 aaKnown RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 ANAPC15P60006 121 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 CDCP2Q5VXM1 449 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 INTS3Q68E01 1043 aaKnown RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 SLC6A19Q695T7 634 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 FAM9AQ8IZU1 332 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 C2CD4AQ8NCU7 369 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 FAM13CQ8NE31 585 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 ATG4CQ96DT6 458 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 TJP2Q9UDY2 1190 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 ACTL7BQ9Y614 415 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 SLC12A7Q9Y666 1083 aa6.28□□□□□ -1.4
BRCA1-204ENST00000412061 MRPL42Q9Y6G3 142 aaKnown RBP6.28□□□□□ -1.4
BRCA1-204ENST00000412061 CHURC1-FNTBB4DL54 471 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 GAS2O43903 313 aaKnown RBP6.27□□□□□ -1.41
BRCA1-204ENST00000412061 DNAJA2O60884 412 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 RNGTTO60942 597 aaKnown RBP6.27□□□□□ -1.41
BRCA1-204ENST00000412061 ALX3O95076 343 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 NEFMP07197 916 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 GLB1P16278 677 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 HSD3B2P26439 372 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 FXNQ16595 210 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 ARSHQ5FYA8 562 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 TTC6Q86TZ1 520 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 ALYREFQ86V81 257 aaKnown RBP6.27□□□□□ -1.41
BRCA1-204ENST00000412061 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
BRCA1-204ENST00000412061 MRFAP1L1Q96HT8 127 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 TNKS2Q9H2K2 1166 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 CNNM2Q9H8M5 875 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 SSU72Q9NP77 194 aaKnown RBP6.27□□□□□ -1.41
BRCA1-204ENST00000412061 KLHL42Q9P2K6 505 aa6.27□□□□□ -1.41
BRCA1-204ENST00000412061 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-204ENST00000412061 A0A1W2PQH9 124 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 TNFRSF10CO14798 259 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 RAG1P15918 1043 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 CAP2P40123 477 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 PREPP48147 710 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 RNF187Q5TA31 235 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-204ENST00000412061 LARP1BQ659C4 914 aaKnown RBP6.26□□□□□ -1.41
BRCA1-204ENST00000412061 Q6ZS46 218 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 SLFN12Q8IYM2 578 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 SMYD4Q8IYR2 804 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-204ENST00000412061 ISL2Q96A47 359 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 FBRSQ9HAH7 460 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 FAM105AQ9NUU6 356 aa6.26□□□□□ -1.41
BRCA1-204ENST00000412061 NOP58Q9Y2X3 529 aaKnown RBP6.26□□□□□ -1.41
BRCA1-204ENST00000412061 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-204ENST00000412061 UPK3BL1B0FP48 263 aa6.25□□□□□ -1.41
BRCA1-204ENST00000412061 UPK3BL2E5RIL1 263 aa6.25□□□□□ -1.41
BRCA1-204ENST00000412061 ACRP10323 421 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms