RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 RGS22Q8NE09 1264 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 ADCY9O60503 1353 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 CLTCQ00610 1675 aaKnown RBP16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 KRT9P35527 623 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 MAGEA9P43362 315 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 CC2D1AQ6P1N0 951 aaPredicted RBP16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 CRACR2BQ8N4Y2 399 aaPredicted RBP16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 TMEM87BQ96K49 555 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 MED4Q9NPJ6 270 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 POLR2DO15514 142 aaKnown RBP16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 EFCAB13Q8IY85 973 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 VWDEQ8N2E2 1590 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 CTSWP56202 376 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 RSRC1Q96IZ7 334 aaKnown RBP16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 GPHNQ9NQX3 736 aaPredicted RBP16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 MAST3O60307 1309 aa16.41■□□□□ 0.22
RPRD1A-202ENST00000399022 OVOS2A0A0J9YW53 1432 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 OVOS2Q6IE36 1432 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 CCDC172P0C7W6 258 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 PHKA1P46020 1223 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 NOP2P46087 812 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 CDC23Q9UJX2 597 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 A0A087WUV0 522 aaPredicted RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 EIF3CLB5ME19 914 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 ST5P78524 1137 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 SARNPP82979 210 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 ZBTB38Q8NAP3 1195 aaPredicted RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 PLIN2Q99541 437 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 EIF3CQ99613 913 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 SEPT11Q9NVA2 429 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 NEBLO76041 1014 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 LDHCP07864 332 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 ZNF174Q15697 407 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 SARM1Q6SZW1 724 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 MLKLQ8NB16 471 aa16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
RPRD1A-202ENST00000399022 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.22
RPRD1A-202ENST00000399022 PDE6AP16499 860 aa16.39■□□□□ 0.22
RPRD1A-202ENST00000399022 MCM7P33993 719 aa16.39■□□□□ 0.22
RPRD1A-202ENST00000399022 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.22
RPRD1A-202ENST00000399022 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.22
RPRD1A-202ENST00000399022 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.22
RPRD1A-202ENST00000399022 PPFIA1Q13136 1202 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 ZRSR2Q15696 482 aaKnown RBP16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 TTC19Q6DKK2 380 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 ZNF274Q96GC6 653 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 TMTC1Q8IUR5 882 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 PGBD1Q96JS3 809 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 PSMB7Q99436 277 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 ANKARQ7Z5J8 1434 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 STX10O60499 249 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 CHGBP05060 677 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 ATP1A3P13637 1013 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 ZNF827Q17R98 1081 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 SPTY2D1Q68D10 685 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
RPRD1A-202ENST00000399022 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 RNF40O75150 1001 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 ZNF526Q8TF50 670 aaPredicted RBP16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 M0R2C6 588 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 CYP26C1Q6V0L0 522 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 BCAMP50895 628 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 ATP1A2P50993 1020 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 RCOR1Q9UKL0 485 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
RPRD1A-202ENST00000399022 ZNF76P36508 570 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 PRPF4BQ13523 1007 aaKnown RBP16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 WHAMMP3Q1A5X7 153 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 CAPS2Q9BXY5 557 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 STAT6P42226 847 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 MAPK8IP1Q9UQF2 711 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 KRT2P35908 639 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 WWC2Q6AWC2 1192 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 STAMQ92783 540 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 CABS1Q96KC9 395 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 SF3A3Q12874 501 aaKnown RBP eCLIP16.37■□□□□ 0.211e-12■■□□□ 12.2
RPRD1A-202ENST00000399022 CEP85LQ5SZL2 805 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 TTC14Q96N46 770 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
RPRD1A-202ENST00000399022 GNPATO15228 680 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms