RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 GPR142Q7Z601 462 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 PLEKHH3Q7Z736 793 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 GTF3C2Q8WUA4 911 aaPredicted RBP10.46□□□□□ -0.74
SCFD1-202ENST00000396629 CDX2Q99626 313 aaPredicted RBP10.46□□□□□ -0.74
SCFD1-202ENST00000396629 APBA2Q99767 749 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 PORCNQ9H237 461 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 COPRSQ9NQ92 184 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 TIMM10P62072 90 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 GSTO1P78417 241 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 SSH1Q8WYL5 1049 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 NSUN4Q96CB9 384 aaKnown RBP10.45□□□□□ -0.74
SCFD1-202ENST00000396629 SENP6Q9GZR1 1112 aaPredicted RBP10.45□□□□□ -0.74
SCFD1-202ENST00000396629 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 PA2G4Q9UQ80 394 aaKnown RBP10.45□□□□□ -0.74
SCFD1-202ENST00000396629 ASNSP08243 561 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 JAG1P78504 1218 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 METTL16Q86W50 562 aaKnown RBP10.45□□□□□ -0.74
SCFD1-202ENST00000396629 MAFAQ8NHW3 353 aaPredicted RBP10.45□□□□□ -0.74
SCFD1-202ENST00000396629 XAGE2Q96GT9 111 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 GINM1Q9NU53 330 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 PI4KBQ9UBF8 816 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 ZNF521Q96K83 1311 aa10.45□□□□□ -0.74
SCFD1-202ENST00000396629 UBTFL1P0CB47 393 aaPredicted RBP10.44□□□□□ -0.74
SCFD1-202ENST00000396629 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
SCFD1-202ENST00000396629 DHX36Q9H2U1 1008 aaKnown RBP10.44□□□□□ -0.74
SCFD1-202ENST00000396629 DNAH12Q6ZR08 3092 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 A0A1B0GUL7 405 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 USP17L10C9JJH3 530 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 RTP1P59025 263 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 MVPQ14764 893 aaKnown RBP10.43□□□□□ -0.74
SCFD1-202ENST00000396629 SHHQ15465 462 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 MFSD14CQ5VZR4 134 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 CCAR1Q8IX12 1150 aaKnown RBP10.43□□□□□ -0.74
SCFD1-202ENST00000396629 TEX11Q8IYF3 940 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 LPAR1Q92633 364 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 EDC3Q96F86 508 aaKnown RBP10.43□□□□□ -0.74
SCFD1-202ENST00000396629 FLRT1Q9NZU1 646 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 HMG20BQ9P0W2 317 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 DDX20Q9UHI6 824 aaKnown RBP10.43□□□□□ -0.74
SCFD1-202ENST00000396629 AKAP2Q9Y2D5 859 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 DNM1LO00429 736 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 MSCO60682 206 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 CNMDO75829 334 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 SMAD3P84022 425 aaKnown RBP10.43□□□□□ -0.74
SCFD1-202ENST00000396629 PAGR1Q9BTK6 254 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 DNAJC18Q9H819 358 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 EMILIN3Q9NT22 766 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 PRKAG2Q9UGJ0 569 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 RABGAP1Q9Y3P9 1069 aa10.43□□□□□ -0.74
SCFD1-202ENST00000396629 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 SLC15A5A6NIM6 579 aa10.42□□□□□ -0.74
SCFD1-202ENST00000396629 IGHA2P01877 340 aa10.42□□□□□ -0.74
SCFD1-202ENST00000396629 HOXC6P09630 235 aa10.42□□□□□ -0.74
SCFD1-202ENST00000396629 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 SHROOM1Q2M3G4 852 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 USP17L2Q6R6M4 530 aa10.42□□□□□ -0.74
SCFD1-202ENST00000396629 TBC1D9Q6ZT07 1266 aa10.42□□□□□ -0.74
SCFD1-202ENST00000396629 FOXP4Q8IVH2 680 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 SH3RF3Q8TEJ3 882 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 MYLIPQ8WY64 445 aa10.42□□□□□ -0.74
SCFD1-202ENST00000396629 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 TTYH1Q9H313 450 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 HDAC5Q9UQL6 1122 aa10.42□□□□□ -0.74
SCFD1-202ENST00000396629 SPTBN5Q9NRC6 3674 aaKnown RBP10.42□□□□□ -0.74
SCFD1-202ENST00000396629 GLRX3O76003 335 aaKnown RBP10.41□□□□□ -0.74
SCFD1-202ENST00000396629 PTPREP23469 700 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 TFCP2Q12800 502 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 ALDH1L2Q3SY69 923 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 C9orf50Q5SZB4 431 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 SPATA5Q8NB90 893 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 RNF39Q9H2S5 420 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 ZBTB21Q9ULJ3 1066 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 MYO5AQ9Y4I1 1855 aaKnown RBP10.41□□□□□ -0.74
SCFD1-202ENST00000396629 MYH1P12882 1939 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-202ENST00000396629 PPP4CP60510 307 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 CCNA1P78396 465 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 PI16Q6UXB8 463 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 SLC39A5Q6ZMH5 540 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 TRPV1Q8NER1 839 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 C12orf42Q96LP6 360 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 RAI14Q9P0K7 980 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-202ENST00000396629 ZNF236Q9UL36 1845 aa10.41□□□□□ -0.74
SCFD1-202ENST00000396629 EYSQ5T1H1 3165 aa10.4□□□□□ -0.74
SCFD1-202ENST00000396629 GDF11O95390 407 aa10.4□□□□□ -0.74
SCFD1-202ENST00000396629 ATP2B2Q01814 1243 aa10.4□□□□□ -0.74
SCFD1-202ENST00000396629 SNX17Q15036 470 aa10.4□□□□□ -0.74
SCFD1-202ENST00000396629 NPLOC4Q8TAT6 608 aa10.4□□□□□ -0.74
SCFD1-202ENST00000396629 CWC22Q9HCG8 908 aaKnown RBP10.4□□□□□ -0.74
SCFD1-202ENST00000396629 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
SCFD1-202ENST00000396629 TMEM265A0A087WTH1 108 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L15C9J2P7 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L13C9JLJ4 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L11C9JVI0 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L18D6R9N7 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L22D6RA61 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L17D6RBQ6 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L19D6RCP7 530 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms