RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 SYNMO15061 1565 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 P4HA1P13674 534 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 SPATA5Q8NB90 893 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ERO1AQ96HE7 468 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 RHOXF2BP0C7M4 288 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 IL13P35225 146 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 CFAP221Q4G0U5 840 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 TTC38Q5R3I4 469 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 RHOXF2Q9BQY4 288 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ARMT1Q9H993 441 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 NOD1Q9Y239 953 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 SSH2Q76I76 1423 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 KIAA0232Q92628 1395 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 PPP2R5EQ16537 467 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 AZI2Q9H6S1 392 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 CHL1O00533 1208 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 TXKP42681 527 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 INTS8Q75QN2 995 aaKnown RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 TTC16Q8NEE8 873 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 RPGRIP1Q96KN7 1286 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 TM6SF1Q9BZW5 370 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ARHGEF5Q12774 1597 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC160A6NGH7 325 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 ARHGAP6O43182 974 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 KRT9P35527 623 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 OGFRQ9NZT2 677 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 V9GY48 417 aaPredicted RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 EVCP57679 992 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 LACTBP83111 547 aaPredicted RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 SP4Q02446 784 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 MICALL1Q8N3F8 863 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 NSMCE1Q8WV22 266 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 SNX14Q9Y5W7 946 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 TLDC2A0PJX2 215 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GOLGA6CA6NDK9 693 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GOLGA6BA6NDN3 693 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 ZBED4O75132 1171 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GOLGA6DP0CG33 693 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 ADCY7P51828 1080 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 TNFAIP1Q13829 316 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GPATCH11Q8N954 259 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 CARD10Q9BWT7 1032 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GOLGA6AQ9NYA3 693 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 PNMA2Q9UL42 364 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 KCNA6P17658 529 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 REXO1Q8N1G1 1221 aaKnown RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 RNF34Q969K3 372 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 RAB17Q9H0T7 212 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 M0QZ92 97 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 NLRP12P59046 1061 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GCKRQ14397 625 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 NONOQ15233 471 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GALNT17Q6IS24 598 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF274Q96GC6 653 aaPredicted RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 CLASP1Q7Z460 1538 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 PER1O15534 1290 aaPredicted RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 TPD52P55327 224 aaPredicted RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 MYCT1Q8N699 235 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 PLIN2Q99541 437 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 RASSF2P50749 326 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 SLFN12Q8IYM2 578 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 YWHAEP62258 255 aaKnown RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GNPTABQ3T906 1256 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 SNX29Q8TEQ0 813 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 AS3MTQ9HBK9 375 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 SLC5A4Q9NY91 659 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 ATP2C2O75185 946 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 CRCPO75575 148 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 DIS3L2Q8IYB7 885 aaKnown RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 IPO4Q8TEX9 1081 aaKnown RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 SECISBP2LQ93073 1101 aaKnown RBP6.06□□□□□ -1.44
VPS13C-204ENST00000395898 GJA3Q9Y6H8 435 aa6.06□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF532Q9HCE3 1301 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 SAMD9Q5K651 1589 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 HMGB1P1B2RPK0 211 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 KIF11P52732 1056 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 CTSWP56202 376 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF445P59923 1031 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 KRT24Q2M2I5 525 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 HERC4Q5GLZ8 1057 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 GOLGA5Q8TBA6 731 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 HAUS7Q99871 368 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 GIGYF1O75420 1035 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 GTF2A1P52655 376 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 GRM1Q13255 1194 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 DCUN1D2Q6PH85 259 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 PPANQ9NQ55 473 aaKnown RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 LRWD1Q9UFC0 647 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 PZPP20742 1482 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 SMIM23A6NLE4 172 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 SH3BP5O60239 455 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 XRCC5P13010 732 aaKnown RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 ATP5JP18859 108 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 FLAD1Q8NFF5 587 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 CLSTN2Q9H4D0 955 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 NCKAP5LQ9HCH0 1330 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 KDM5DQ9BY66 1539 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms