RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 LMBR1LQ6UX01 489 aa13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 NCOR1O75376 2440 aa13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 RTP1P59025 263 aa13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 MRPS5P82675 430 aaKnown RBP13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 GRIN2CQ14957 1233 aa13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 SUCLG2Q96I99 432 aa13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 MORF4L1Q9UBU8 362 aa13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
VTI1BP2-201ENST00000394154 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
VTI1BP2-201ENST00000394154 MTX1Q13505 466 aa13.49□□□□□ -0.25
VTI1BP2-201ENST00000394154 ANKRD45Q5TZF3 282 aa13.49□□□□□ -0.25
VTI1BP2-201ENST00000394154 BADQ92934 168 aa13.49□□□□□ -0.25
VTI1BP2-201ENST00000394154 DAGLAQ9Y4D2 1042 aa13.49□□□□□ -0.25
VTI1BP2-201ENST00000394154 BDP1A6H8Y1 2624 aa13.49□□□□□ -0.25
VTI1BP2-201ENST00000394154 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
VTI1BP2-201ENST00000394154 PNMA6EA0A0J9YXQ4 647 aa13.48□□□□□ -0.25
VTI1BP2-201ENST00000394154 NUCB1Q02818 461 aa13.48□□□□□ -0.25
VTI1BP2-201ENST00000394154 POLA2Q14181 598 aa13.48□□□□□ -0.25
VTI1BP2-201ENST00000394154 ASCC2Q9H1I8 757 aaPredicted RBP13.48□□□□□ -0.25
VTI1BP2-201ENST00000394154 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
VTI1BP2-201ENST00000394154 ATP11BQ9Y2G3 1177 aa13.48□□□□□ -0.25
VTI1BP2-201ENST00000394154 DNM1LO00429 736 aa13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 MAP3K10Q02779 954 aa13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 HSP90AB4PQ58FF6 505 aa13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 AKNAD1Q5T1N1 836 aa13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 KAZALD1Q96I82 304 aa13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 GAS2L1Q99501 681 aaPredicted RBP13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 PRDM5Q9NQX1 630 aaPredicted RBP13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
VTI1BP2-201ENST00000394154 MSCO60682 206 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 ENTPD3O75355 529 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 DNAJB2P25686 324 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 MAPK4P31152 587 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 RGS2P41220 211 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 RGS3P49796 1198 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 PPM1EQ8WY54 764 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 LPAR1Q92633 364 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 USP6NLQ92738 828 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 SNX27Q96L92 541 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 APBA2Q99767 749 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 ZNF576Q9H609 170 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 RLFQ13129 1914 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
VTI1BP2-201ENST00000394154 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 CCL14Q16627 93 aa13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 RABL6Q3YEC7 729 aaPredicted RBP13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 CCDC84Q86UT8 332 aaPredicted RBP13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 WDR66Q8TBY9 1149 aa13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 PUS3Q9BZE2 481 aaKnown RBP13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
VTI1BP2-201ENST00000394154 HMGCS2P54868 508 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 SPP2Q13103 211 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 ZNF280CQ8ND82 737 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 GPRC5AQ8NFJ5 357 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 IDI2Q9BXS1 227 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 PDLIM7Q9NR12 457 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 EXOC6BQ9Y2D4 811 aa13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
VTI1BP2-201ENST00000394154 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 APBB1O00213 710 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 OS9Q13438 667 aaPredicted RBP13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 MORN1Q5T089 497 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 MFSD14CQ5VZR4 134 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 SLC39A5Q6ZMH5 540 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 SKAP1Q86WV1 359 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 ERC1Q8IUD2 1116 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 CCAR1Q8IX12 1150 aaKnown RBP13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
VTI1BP2-201ENST00000394154 SNX17Q15036 470 aa13.42□□□□□ -0.26
VTI1BP2-201ENST00000394154 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
VTI1BP2-201ENST00000394154 SH3D19Q5HYK7 790 aa13.42□□□□□ -0.26
VTI1BP2-201ENST00000394154 METTL24Q5JXM2 366 aa13.42□□□□□ -0.26
VTI1BP2-201ENST00000394154 SH3BP5LQ7L8J4 393 aa13.42□□□□□ -0.26
VTI1BP2-201ENST00000394154 GPR142Q7Z601 462 aa13.42□□□□□ -0.26
VTI1BP2-201ENST00000394154 RFX7Q2KHR2 1363 aa13.42□□□□□ -0.26
VTI1BP2-201ENST00000394154 ATAD5Q96QE3 1844 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms