RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 KIAA1551Q9HCM1 1747 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 WDHD1O75717 1129 aaPredicted RBP17.42■□□□□ 0.38
MKS1-202ENST00000393119 PDE4BQ07343 736 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 TROAPQ12815 778 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
MKS1-202ENST00000393119 APOBEC3HQ6NTF7 200 aaKnown RBP17.42■□□□□ 0.38
MKS1-202ENST00000393119 IQCA1Q86XH1 822 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
MKS1-202ENST00000393119 ESPNB1AK53 854 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 PPIP5K2O43314 1243 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 UBE2HP62256 183 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 DACT2Q5SW24 774 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 KRT40Q6A162 431 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 CDC42EP5Q6NZY7 148 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 CLEC10AQ8IUN9 316 aa17.42■□□□□ 0.38
MKS1-202ENST00000393119 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
MKS1-202ENST00000393119 PSDA5PKW4 1024 aaPredicted RBP17.41■□□□□ 0.38
MKS1-202ENST00000393119 RASA1P20936 1047 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 CDK8P49336 464 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 TCP10Q12799 353 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 PODNQ7Z5L7 613 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 TTLL6Q8N841 843 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 CLIC4Q9Y696 253 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
MKS1-202ENST00000393119 FAM196BA6NMK8 535 aa17.4■□□□□ 0.38
MKS1-202ENST00000393119 CRKP46108 304 aa17.4■□□□□ 0.38
MKS1-202ENST00000393119 RBM5P52756 815 aaKnown RBP eCLIP17.4■□□□□ 0.38
MKS1-202ENST00000393119 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
MKS1-202ENST00000393119 CRACR2BQ8N4Y2 399 aaPredicted RBP17.4■□□□□ 0.38
MKS1-202ENST00000393119 RAD17O75943 681 aa17.4■□□□□ 0.38
MKS1-202ENST00000393119 FMNL1O95466 1100 aaPredicted RBP17.4■□□□□ 0.38
MKS1-202ENST00000393119 KIF23Q02241 960 aaPredicted RBP17.4■□□□□ 0.38
MKS1-202ENST00000393119 SHROOM1Q2M3G4 852 aaPredicted RBP17.4■□□□□ 0.38
MKS1-202ENST00000393119 ZMYND15Q9H091 742 aa17.4■□□□□ 0.38
MKS1-202ENST00000393119 ZSCAN16Q9H4T2 348 aaPredicted RBP17.4■□□□□ 0.38
MKS1-202ENST00000393119 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
MKS1-202ENST00000393119 MBD3O95983 291 aa17.39■□□□□ 0.38
MKS1-202ENST00000393119 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.38
MKS1-202ENST00000393119 IFNAR1P17181 557 aa17.39■□□□□ 0.38
MKS1-202ENST00000393119 CPVLQ9H3G5 476 aa17.39■□□□□ 0.38
MKS1-202ENST00000393119 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
MKS1-202ENST00000393119 KIAA2012Q0VF49 1180 aa17.39■□□□□ 0.37
MKS1-202ENST00000393119 CAMK4Q16566 473 aa17.39■□□□□ 0.37
MKS1-202ENST00000393119 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.37
MKS1-202ENST00000393119 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
MKS1-202ENST00000393119 KIF3AQ9Y496 699 aa17.39■□□□□ 0.37
MKS1-202ENST00000393119 V9GY48 417 aaPredicted RBP17.39■□□□□ 0.37
MKS1-202ENST00000393119 COL4A5P29400 1685 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 TSPY3P0CV98 308 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 TSPY8P0CW00 308 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 FUT2Q10981 343 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 CATIPQ7Z7H3 387 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
MKS1-202ENST00000393119 TMTC2Q8N394 836 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 SRBD1Q8N5C6 995 aaKnown RBP17.38■□□□□ 0.37
MKS1-202ENST00000393119 OXER1Q8TDS5 423 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 STX8Q9UNK0 236 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 EIF6P56537 245 aaKnown RBP17.38■□□□□ 0.37
MKS1-202ENST00000393119 TEKT1Q969V4 418 aa17.38■□□□□ 0.37
MKS1-202ENST00000393119 BTBD18B2RXH4 712 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 CDKL5O76039 1030 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 PKN1Q16512 942 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 STRIP1Q5VSL9 837 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 CPLX2Q6PUV4 134 aaKnown RBP17.37■□□□□ 0.37
MKS1-202ENST00000393119 VPS54Q9P1Q0 977 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 BAZ2BQ9UIF8 2168 aaKnown RBP17.37■□□□□ 0.37
MKS1-202ENST00000393119 ZNF445P59923 1031 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 NR5A1Q13285 461 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 SLF2Q8IX21 1173 aa17.37■□□□□ 0.37
MKS1-202ENST00000393119 SCAF8Q9UPN6 1271 aaKnown RBP17.37■□□□□ 0.37
MKS1-202ENST00000393119 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
MKS1-202ENST00000393119 NOM1Q5C9Z4 860 aaKnown RBP17.36■□□□□ 0.37
MKS1-202ENST00000393119 C16orf86Q6ZW13 317 aa17.36■□□□□ 0.37
MKS1-202ENST00000393119 RNF214Q8ND24 703 aa17.36■□□□□ 0.37
MKS1-202ENST00000393119 SCAND2PQ9GZW5 306 aaPredicted RBP17.36■□□□□ 0.37
MKS1-202ENST00000393119 FAM205CA6NFA0 338 aa17.36■□□□□ 0.37
MKS1-202ENST00000393119 NR1I2O75469 434 aa17.36■□□□□ 0.37
MKS1-202ENST00000393119 AMOTL1Q8IY63 956 aa17.36■□□□□ 0.37
MKS1-202ENST00000393119 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.36■□□□□ 0.37
MKS1-202ENST00000393119 GOLPH3LQ9H4A5 285 aa17.36■□□□□ 0.37
MKS1-202ENST00000393119 TDRD3Q9H7E2 651 aaKnown RBP17.36■□□□□ 0.37
MKS1-202ENST00000393119 CDK5RAP2Q96SN8 1893 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 PCP11498 1178 aaKnown RBP17.35■□□□□ 0.37
MKS1-202ENST00000393119 PLCG2P16885 1265 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 MYSM1Q5VVJ2 828 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
MKS1-202ENST00000393119 PNMA1Q8ND90 353 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 TMEM47Q9BQJ4 181 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 LAMB1P07942 1786 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 ROBO3Q96MS0 1386 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 DDTLA6NHG4 134 aaPredicted RBP17.35■□□□□ 0.37
MKS1-202ENST00000393119 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
MKS1-202ENST00000393119 AKR1B1P15121 316 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 CEP95Q96GE4 821 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 PRMT6Q96LA8 375 aaPredicted RBP17.35■□□□□ 0.37
MKS1-202ENST00000393119 MTA3Q9BTC8 594 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 KAT14Q9H8E8 782 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms