RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TPM3P06753 285 aa26.72■■□□□ 1.87
VPS16-201ENST00000380443 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.72■■□□□ 1.87
VPS16-201ENST00000380443 GGA1Q9UJY5 639 aa26.72■■□□□ 1.87
VPS16-201ENST00000380443 BAZ2AQ9UIF9 1905 aaKnown RBP26.72■■□□□ 1.87
VPS16-201ENST00000380443 ZNF500O60304 480 aaPredicted RBP26.72■■□□□ 1.87
VPS16-201ENST00000380443 AKAP17AQ02040 695 aaKnown RBP26.72■■□□□ 1.87
VPS16-201ENST00000380443 CCDC178Q5BJE1 867 aa26.72■■□□□ 1.87
VPS16-201ENST00000380443 NUP133Q8WUM0 1156 aa26.72■■□□□ 1.87
VPS16-201ENST00000380443 GPSM2P81274 684 aa26.71■■□□□ 1.87
VPS16-201ENST00000380443 NOSTRINQ8IVI9 506 aa26.71■■□□□ 1.87
VPS16-201ENST00000380443 CBX8Q9HC52 389 aa26.71■■□□□ 1.87
VPS16-201ENST00000380443 IL1R1P14778 569 aa26.7■■□□□ 1.87
VPS16-201ENST00000380443 AXDND1Q5T1B0 1012 aaPredicted RBP26.7■■□□□ 1.87
VPS16-201ENST00000380443 AMOTL1Q8IY63 956 aa26.7■■□□□ 1.87
VPS16-201ENST00000380443 TIGD1Q96MW7 591 aa26.7■■□□□ 1.87
VPS16-201ENST00000380443 ANO10Q9NW15 660 aa26.7■■□□□ 1.87
VPS16-201ENST00000380443 PRPF3O43395 683 aaKnown RBP26.69■■□□□ 1.86
VPS16-201ENST00000380443 ZNF165P49910 485 aa26.69■■□□□ 1.86
VPS16-201ENST00000380443 STK11IPQ8N1F8 1099 aa26.69■■□□□ 1.86
VPS16-201ENST00000380443 ATF5Q9Y2D1 282 aaPredicted RBP26.69■■□□□ 1.86
VPS16-201ENST00000380443 FAM237AA0A1B0GTK4 181 aa26.69■■□□□ 1.86
VPS16-201ENST00000380443 POLRMTO00411 1230 aaKnown RBP26.69■■□□□ 1.86
VPS16-201ENST00000380443 RILPL1Q5EBL4 403 aa26.69■■□□□ 1.86
VPS16-201ENST00000380443 SLF2Q8IX21 1173 aa26.69■■□□□ 1.86
VPS16-201ENST00000380443 MAP3K14Q99558 947 aa26.69■■□□□ 1.86
VPS16-201ENST00000380443 MYH2Q9UKX2 1941 aa26.69■■□□□ 1.86
VPS16-201ENST00000380443 CYP2D7A0A087X1C5 515 aa26.68■■□□□ 1.86
VPS16-201ENST00000380443 UFL1O94874 794 aa26.68■■□□□ 1.86
VPS16-201ENST00000380443 PTPAQ15257 358 aa26.68■■□□□ 1.86
VPS16-201ENST00000380443 CD209Q9NNX6 404 aa26.68■■□□□ 1.86
VPS16-201ENST00000380443 MKRN1Q9UHC7 482 aaKnown RBP26.68■■□□□ 1.86
VPS16-201ENST00000380443 MORC2Q9Y6X9 1032 aaPredicted RBP26.68■■□□□ 1.86
VPS16-201ENST00000380443 GOLGA6L6A8MZA4 724 aa26.67■■□□□ 1.86
VPS16-201ENST00000380443 CUTAO60888 179 aa26.67■■□□□ 1.86
VPS16-201ENST00000380443 TBC1D22AQ8WUA7 517 aa26.67■■□□□ 1.86
VPS16-201ENST00000380443 SDF4Q9BRK5 362 aa26.67■■□□□ 1.86
VPS16-201ENST00000380443 NDUFA8P51970 172 aa26.67■■□□□ 1.86
VPS16-201ENST00000380443 TROAPQ12815 778 aa26.67■■□□□ 1.86
VPS16-201ENST00000380443 C12orf60Q5U649 245 aa26.67■■□□□ 1.86
VPS16-201ENST00000380443 DIS3L2Q8IYB7 885 aaKnown RBP26.67■■□□□ 1.86
VPS16-201ENST00000380443 ROBO3Q96MS0 1386 aa26.66■■□□□ 1.86
VPS16-201ENST00000380443 PLCG2P16885 1265 aa26.66■■□□□ 1.86
VPS16-201ENST00000380443 USP5P45974 858 aa26.66■■□□□ 1.86
VPS16-201ENST00000380443 NLGN1Q8N2Q7 840 aa26.66■■□□□ 1.86
VPS16-201ENST00000380443 NAT10Q9H0A0 1025 aaKnown RBP26.66■■□□□ 1.86
VPS16-201ENST00000380443 MCM9Q9NXL9 1143 aa26.66■■□□□ 1.86
VPS16-201ENST00000380443 SRCAPQ6ZRS2 3230 aa26.66■■□□□ 1.86
VPS16-201ENST00000380443 MROH7-TTC4A0A0A0MT08 1334 aa26.66■■□□□ 1.86
VPS16-201ENST00000380443 A0A1B0GVL5 298 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 POLD1P28340 1107 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 DDR1Q08345 913 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 SP8Q8IXZ3 490 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 ANKS1AQ92625 1134 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.65■■□□□ 1.86
VPS16-201ENST00000380443 GUCY1A2P33402 732 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 FUT2Q10981 343 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 CTCFLQ8NI51 663 aaPredicted RBP26.65■■□□□ 1.86
VPS16-201ENST00000380443 FAM163AQ96GL9 167 aaPredicted RBP26.65■■□□□ 1.86
VPS16-201ENST00000380443 DNAJC25Q9H1X3 360 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 CEP131Q9UPN4 1083 aa26.65■■□□□ 1.86
VPS16-201ENST00000380443 ZNF202O95125 648 aa26.64■■□□□ 1.85
VPS16-201ENST00000380443 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.64■■□□□ 1.85
VPS16-201ENST00000380443 LUZP1Q86V48 1076 aa26.64■■□□□ 1.85
VPS16-201ENST00000380443 DGKHQ86XP1 1220 aa26.64■■□□□ 1.85
VPS16-201ENST00000380443 ZNF287Q9HBT7 754 aa26.64■■□□□ 1.85
VPS16-201ENST00000380443 PRDM1O75626 825 aa26.63■■□□□ 1.85
VPS16-201ENST00000380443 TMTC3Q6ZXV5 915 aa26.63■■□□□ 1.85
VPS16-201ENST00000380443 ELOA2Q8IYF1 753 aaPredicted RBP26.63■■□□□ 1.85
VPS16-201ENST00000380443 HPSEQ9Y251 543 aa26.63■■□□□ 1.85
VPS16-201ENST00000380443 BTBD18B2RXH4 712 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 KIF5BP33176 963 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 TBC1D16Q8TBP0 767 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 TCP11L1Q9NUJ3 509 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 KIAA1468Q9P260 1216 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 PPP1R1BQ9UD71 204 aaPredicted RBP26.62■■□□□ 1.85
VPS16-201ENST00000380443 LRRC37AA6NMS7 1700 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 TSPY2A6NKD2 308 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 GOLGA6L19H0YKK7 550 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 SMIM22K7EJ46 135 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 WDHD1O75717 1129 aaPredicted RBP26.62■■□□□ 1.85
VPS16-201ENST00000380443 PFKFB1P16118 471 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 ZRSR1Q15695 479 aaKnown RBP26.62■■□□□ 1.85
VPS16-201ENST00000380443 RESP18Q5W5W9 173 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 MSL1Q68DK7 614 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 CEP57L1Q8IYX8 460 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 FAM205AQ6ZU69 1335 aa26.62■■□□□ 1.85
VPS16-201ENST00000380443 GPR75-ASB3A0A0A6YYF3 556 aa26.61■■□□□ 1.85
VPS16-201ENST00000380443 PTGER2P43116 358 aa26.61■■□□□ 1.85
VPS16-201ENST00000380443 PLCB2Q00722 1185 aa26.61■■□□□ 1.85
VPS16-201ENST00000380443 IQCB1Q15051 598 aa26.61■■□□□ 1.85
VPS16-201ENST00000380443 KRI1Q8N9T8 703 aaKnown RBP26.61■■□□□ 1.85
VPS16-201ENST00000380443 SH3RF3Q8TEJ3 882 aaPredicted RBP26.61■■□□□ 1.85
VPS16-201ENST00000380443 BRMS1Q9HCU9 246 aa26.61■■□□□ 1.85
VPS16-201ENST00000380443 SUGT1Q9Y2Z0 365 aa26.61■■□□□ 1.85
VPS16-201ENST00000380443 KIAA2012Q0VF49 1180 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 SARM1Q6SZW1 724 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 BPIFA3Q9BQP9 254 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 RTFDC1Q9BY42 306 aaPredicted RBP26.6■■□□□ 1.85
VPS16-201ENST00000380443 JAG2Q9Y219 1238 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 MYH6P13533 1939 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms