RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ELP1O95163 1332 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 TMEM110-MUSTN1A8MSY1 372 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 KRT79Q5XKE5 535 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 RAB3IL1Q8TBN0 382 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 EEF2P13639 858 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 MAP3K9P80192 1104 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 RIOK3O14730 519 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 APBA3O96018 575 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 CCDC50Q8IVM0 306 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 IQUBQ8NA54 791 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 C6orf50Q9HD87 102 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 SSX2IPQ9Y2D8 614 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 ATP6V0A2Q9Y487 856 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 MAST3O60307 1309 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 GJC1P36383 396 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 WDR78Q5VTH9 848 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 UBLCP1Q8WVY7 318 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 EAF2Q96CJ1 260 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 PSMD1Q99460 953 aa13.76□□□□□ -0.21
NPLOC4-202ENST00000374747 A6NNZ2 444 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 NOL3O60936 208 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 CRKLP46109 303 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 TUBB8Q3ZCM7 444 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 TEX11Q8IYF3 940 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 MYRIPQ8NFW9 859 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 JAKMIP2Q96AA8 810 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 NAPGQ99747 312 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 MTUS1Q9ULD2 1270 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 ATP2A2P16615 1042 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 ZAP70P43403 619 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 INTS8Q75QN2 995 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 CCDC25Q86WR0 208 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 ARMT1Q9H993 441 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 TERF1P54274 439 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 PPP1R7Q15435 360 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 MAP7D1Q3KQU3 841 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 SEC62Q99442 399 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 JAG2Q9Y219 1238 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 NDUFAB1O14561 156 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 SEPT6Q14141 434 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 IMPG2Q9BZV3 1241 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 CPS1P31327 1500 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
NPLOC4-202ENST00000374747 ALDH3A1P30838 453 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 TRIM14Q14142 442 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 CCDC26Q8TAB7 109 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 NKIRAS1Q9NYS0 192 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 SSH2Q76I76 1423 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 H0YIN7 160 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 DTNBO60941 627 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 ATP5DP30049 168 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 FMNL3Q8IVF7 1028 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 DSCC1Q9BVC3 393 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 TRIM7Q9C029 511 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 CCDC110Q8TBZ0 833 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 STMN2Q93045 179 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 ZBTB1Q9Y2K1 713 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 UNC5CLQ8IV45 518 aa13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-202ENST00000374747 ALDH1B1P30837 517 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 LLPHQ9BRT6 129 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 GPR108Q9NPR9 543 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 STAP2Q9UGK3 403 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 A0A1B0GVL5 298 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 CIAO1O76071 339 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 INPP5BP32019 993 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 PSMC4P43686 418 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 ATP11AP98196 1134 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 IGSF22Q8N9C0 903 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 SWAP70Q9UH65 585 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 RRP36Q96EU6 259 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■□□□ 12.2
NPLOC4-202ENST00000374747 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 CPA1P15085 419 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 PPP1R2P41236 205 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 C8orf74Q6P047 294 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 KIAA1524Q8TCG1 905 aa13.73□□□□□ -0.21
NPLOC4-202ENST00000374747 PRAMEF22A3QJZ6 481 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 ARL1P40616 181 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 ZNF445P59923 1031 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 ZNF532Q9HCE3 1301 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 ADAMTS13Q76LX8 1427 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 GOLGA6CA6NDK9 693 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 B4E1Z4 1266 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms