RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PTPDC1A2A3K4 754 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 REC8O95072 547 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 TTC22Q5TAA0 569 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 CEP120Q8N960 986 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 ACER1Q8TDN7 264 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 GPHNQ9NQX3 736 aaPredicted RBP8.23□□□□□ -1.09
USP1-202ENST00000371146 TMEM232C9JQI7 657 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 VEGFBP49765 207 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 MAP3K9P80192 1104 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 CEBPZQ03701 1054 aaKnown RBP8.23□□□□□ -1.09
USP1-202ENST00000371146 KIF22Q14807 665 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 APOBEC3HQ6NTF7 200 aaKnown RBP8.23□□□□□ -1.09
USP1-202ENST00000371146 DPP9Q86TI2 863 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 DPF2Q92785 391 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 HAUS7Q99871 368 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 FBXO28Q9NVF7 368 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 MROH7-TTC4A0A0A0MT08 1334 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 NRAPQ86VF7 1730 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 RPS12P25398 132 aaKnown RBP8.22□□□□□ -1.09
USP1-202ENST00000371146 PTH1RQ03431 593 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 RGMBQ6NW40 437 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 ZNF287Q9HBT7 754 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 GINS2Q9Y248 185 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 U3KPZ7 1027 aaPredicted RBP8.22□□□□□ -1.09
USP1-202ENST00000371146 SEMA3EO15041 775 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 AKR1B1P15121 316 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 APLP1P51693 650 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 IFIT1BQ5T764 474 aaKnown RBP8.22□□□□□ -1.09
USP1-202ENST00000371146 BLOC1S2Q6QNY1 142 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 ANKRD13AQ8IZ07 590 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 FAM184AQ8NB25 1140 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 PPP1R13LQ8WUF5 828 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 BRF1Q92994 677 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 TAF1P21675 1872 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 A0A0C4DFX4 3053 aa8.22□□□□□ -1.09
USP1-202ENST00000371146 HSPA6P17066 643 aa8.21□□□□□ -1.09
USP1-202ENST00000371146 CALML3P27482 149 aa8.21□□□□□ -1.09
USP1-202ENST00000371146 ADD2P35612 726 aa8.21□□□□□ -1.09
USP1-202ENST00000371146 VGLL4Q14135 290 aa8.21□□□□□ -1.09
USP1-202ENST00000371146 RASGRP2Q7LDG7 609 aa8.21□□□□□ -1.09
USP1-202ENST00000371146 CTNNA3Q9UI47 895 aa8.21□□□□□ -1.09
USP1-202ENST00000371146 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.09
USP1-202ENST00000371146 FAM208AQ9UK61 1670 aaKnown RBP8.21□□□□□ -1.09
USP1-202ENST00000371146 ITGB4P16144 1822 aa8.21□□□□□ -1.09
USP1-202ENST00000371146 TNPO2O14787 897 aaKnown RBP8.21□□□□□ -1.1
USP1-202ENST00000371146 PPARAQ07869 468 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 USP17L2Q6R6M4 530 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 NECAB1Q8N987 351 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 ARHGEF10LQ9HCE6 1279 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 DCP1AQ9NPI6 582 aaPredicted RBP8.21□□□□□ -1.1
USP1-202ENST00000371146 MED23Q9ULK4 1368 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 CFBP00751 764 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 ZFYP08048 801 aaPredicted RBP8.21□□□□□ -1.1
USP1-202ENST00000371146 CDK8P49336 464 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 HDAC1Q13547 482 aaPredicted RBP8.21□□□□□ -1.1
USP1-202ENST00000371146 ESR2Q92731 530 aa8.21□□□□□ -1.1
USP1-202ENST00000371146 DDX49Q9Y6V7 483 aaKnown RBP8.21□□□□□ -1.1
USP1-202ENST00000371146 VPS37CA5D8V6 355 aaPredicted RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 VGLL3A8MV65 326 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 MYCLP12524 364 aaPredicted RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 FGFR2P21802 821 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 ZNF76P36508 570 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 SMC5Q8IY18 1101 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 CTCFLQ8NI51 663 aaPredicted RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 MARF1Q9Y4F3 1742 aaKnown RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 C10orf71Q711Q0 1435 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 HIP1O00291 1037 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 HSPD1P10809 573 aaKnown RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 GSPT1P15170 499 aaKnown RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 ANKRD35Q8N283 1001 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 RAET1EQ8TD07 263 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 OSBPL5Q9H0X9 879 aaPredicted RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 SERPINA10Q9UK55 444 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 ZBTB21Q9ULJ3 1066 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 SLC12A7Q9Y666 1083 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 DLG5Q8TDM6 1919 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 FLT1P17948 1338 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 CCDC171Q6TFL3 1326 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
USP1-202ENST00000371146 WTAPQ15007 396 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 FAM83BQ5T0W9 1011 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 PRDM16Q9HAZ2 1276 aa8.2□□□□□ -1.1
USP1-202ENST00000371146 THSD7AQ9UPZ6 1657 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 IL1R1P14778 569 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 CHMLP26374 656 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 MTX1Q13505 466 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 Q3C1V9 767 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 FAM47CQ5HY64 1035 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 VGLL2Q8N8G2 317 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 FAM151AQ8WW52 585 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 NCOA5Q9HCD5 579 aaKnown RBP8.19□□□□□ -1.1
USP1-202ENST00000371146 SDK1Q7Z5N4 2213 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 KLRG2A4D1S0 409 aaPredicted RBP8.19□□□□□ -1.1
USP1-202ENST00000371146 GOLGA8BA8MQT2 603 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 ASNSP08243 561 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 EEF2P13639 858 aaKnown RBP8.19□□□□□ -1.1
USP1-202ENST00000371146 SLFN13Q68D06 897 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 HEATR3Q7Z4Q2 680 aa8.19□□□□□ -1.1
USP1-202ENST00000371146 CERS3Q8IU89 383 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms