RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 MYO6Q9UM54 1294 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 RCCD1A6NED2 376 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 CCDC172P0C7W6 258 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 SCARF1Q14162 830 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 WHAMMP3Q1A5X7 153 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 CCDC102BQ68D86 513 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 CPLX2Q6PUV4 134 aaKnown RBP13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 HDAC7Q8WUI4 952 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 NAPGQ99747 312 aaPredicted RBP13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 METTL22Q9BUU2 404 aaPredicted RBP13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 SLIT3O75094 1523 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 WNT7AO00755 349 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 KIF5CO60282 957 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 OLFM4Q6UX06 510 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 ABHD10Q9NUJ1 306 aa13.26□□□□□ -0.29
SMARCA1-201ENST00000371121 CTAGE15A4D2H0 777 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 PPP1R3GB7ZBB8 358 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 MYO1FO00160 1098 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 ERLIN2O94905 339 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 CTAGE8P0CG41 777 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 MYL6BP14649 208 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 PLCD1P51178 756 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 TTC19Q6DKK2 380 aaPredicted RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 CTAGE6Q86UF2 777 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 CTAGE4Q8IX94 777 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 INCENPQ9NQS7 918 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 DONSONQ9NYP3 566 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 ZNF185O15231 689 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 ERLIN1O75477 346 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 EZH2Q15910 746 aaKnown RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 UBE3BQ7Z3V4 1068 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 TBC1D10CQ8IV04 446 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 NUTM2AQ8IVF1 878 aaPredicted RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 IP6K1Q92551 441 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 HERVK_113P62684 666 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 LRRC24Q50LG9 513 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 TTMPQ5BVD1 217 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 NGDNQ8NEJ9 315 aaKnown RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 AENQ8WTP8 325 aaKnown RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 CEP83Q9Y592 693 aa13.25□□□□□ -0.29
SMARCA1-201ENST00000371121 MYH2Q9UKX2 1941 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 STX17P56962 302 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 WDR59Q6PJI9 974 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 DEF6Q9H4E7 631 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 SUFUQ9UMX1 484 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
SMARCA1-201ENST00000371121 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 PSMD14O00487 310 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 EIF3HO15372 352 aaKnown RBP eCLIP13.23□□□□□ -0.297e-7■□□□□ 9.9
SMARCA1-201ENST00000371121 PTPREP23469 700 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 MYL10Q9BUA6 226 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 SAMM50Q9Y512 469 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 PI16Q6UXB8 463 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 CCNI2Q6ZMN8 369 aaPredicted RBP13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 TSEN2Q8NCE0 465 aaKnown RBP13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 SLF1Q9BQI6 1058 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 MYH6P13533 1939 aa13.23□□□□□ -0.29
SMARCA1-201ENST00000371121 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 PAPD7Q5XG87 772 aaKnown RBP13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 ITIH6Q6UXX5 1313 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 BTBD18B2RXH4 712 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 ATP5J2-PTCD1G3V325 749 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 GPTP24298 496 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 TUBB2AQ13885 445 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 EARS2Q5JPH6 523 aaKnown RBP13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 CCDC91Q7Z6B0 441 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 KRI1Q8N9T8 703 aaKnown RBP13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 MTRQ99707 1265 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 TUBB2BQ9BVA1 445 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 CD248Q9HCU0 757 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 KCNG1Q9UIX4 513 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 DUSP10Q9Y6W6 482 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 LRRC10BA6NIK2 292 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 ERCC5P28715 1186 aaPredicted RBP13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 STIM1Q13586 685 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
SMARCA1-201ENST00000371121 FAM212AQ96EL1 285 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms