RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 GABPAQ06546 454 aa16.38■□□□□ 0.21
SSR4-202ENST00000370085 SNAPC2Q13487 334 aa16.38■□□□□ 0.21
SSR4-202ENST00000370085 ABCB5Q2M3G0 1257 aa16.38■□□□□ 0.21
SSR4-202ENST00000370085 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
SSR4-202ENST00000370085 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 MPHOSPH10O00566 681 aaKnown RBP16.37■□□□□ 0.21
SSR4-202ENST00000370085 AOC2O75106 756 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 FGAP02671 866 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 PTPRAP18433 802 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 CDK8P49336 464 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 KIF23Q02241 960 aaPredicted RBP16.37■□□□□ 0.21
SSR4-202ENST00000370085 PPARAQ07869 468 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 MKRN3Q13064 507 aaKnown RBP16.37■□□□□ 0.21
SSR4-202ENST00000370085 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 ZHX2Q9Y6X8 837 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
SSR4-202ENST00000370085 CYP2D7A0A087X1C5 515 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 CXCL11O14625 94 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 SGSM2O43147 1006 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 GDF11O95390 407 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 CETPP11597 493 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 SHMT1P34896 483 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
SSR4-202ENST00000370085 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 DYNLL2Q96FJ2 89 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
SSR4-202ENST00000370085 THSD7BQ9C0I4 1608 aa16.35■□□□□ 0.21
SSR4-202ENST00000370085 ZNF213O14771 459 aa16.35■□□□□ 0.21
SSR4-202ENST00000370085 GH2P01242 217 aa16.35■□□□□ 0.21
SSR4-202ENST00000370085 SLURP2P0DP57 97 aa16.35■□□□□ 0.21
SSR4-202ENST00000370085 PCP11498 1178 aaKnown RBP16.35■□□□□ 0.21
SSR4-202ENST00000370085 RAB3GAP1Q15042 981 aa16.35■□□□□ 0.21
SSR4-202ENST00000370085 IMMTQ16891 758 aaKnown RBP16.35■□□□□ 0.21
SSR4-202ENST00000370085 TMEM179Q6ZVK1 233 aa16.35■□□□□ 0.21
SSR4-202ENST00000370085 RNF41Q9H4P4 317 aaPredicted RBP16.35■□□□□ 0.21
SSR4-202ENST00000370085 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
SSR4-202ENST00000370085 IRF6O14896 467 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 CA12O43570 354 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 EIF5BO60841 1220 aaKnown RBP16.34■□□□□ 0.21
SSR4-202ENST00000370085 ALDH1A1P00352 501 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 NT5C2P49902 561 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 FASTKD5Q7L8L6 764 aaKnown RBP16.34■□□□□ 0.21
SSR4-202ENST00000370085 SLC44A5Q8NCS7 719 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 ZNF280CQ8ND82 737 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
SSR4-202ENST00000370085 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
SSR4-202ENST00000370085 CCL15-CCL14A0A0B4J2E2 113 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 FOXP2O15409 715 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 TM4SF4P48230 202 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 CCL15Q16663 113 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 WDR18Q9BV38 432 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 SH2D4AQ9H788 454 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 TOMM22Q9NS69 142 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 KCNH4Q9UQ05 1017 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 AFG3L2Q9Y4W6 797 aa16.33■□□□□ 0.2
SSR4-202ENST00000370085 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
SSR4-202ENST00000370085 GJA5P36382 358 aa16.32■□□□□ 0.2
SSR4-202ENST00000370085 MFSD6Q6ZSS7 791 aa16.32■□□□□ 0.2
SSR4-202ENST00000370085 FEZ1Q99689 392 aa16.32■□□□□ 0.2
SSR4-202ENST00000370085 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
SSR4-202ENST00000370085 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
SSR4-202ENST00000370085 PCNTO95613 3336 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 TSPY3P0CV98 308 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 TSPY8P0CW00 308 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 USP14P54578 494 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 EVX2Q03828 476 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 SPP2Q13103 211 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 RRP1BQ14684 758 aaKnown RBP16.31■□□□□ 0.2
SSR4-202ENST00000370085 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 TMOD4Q9NZQ9 345 aa16.31■□□□□ 0.2
SSR4-202ENST00000370085 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
SSR4-202ENST00000370085 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
SSR4-202ENST00000370085 TSPY2A6NKD2 308 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 REC8O95072 547 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 AKR1B1P15121 316 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 RASA1P20936 1047 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 HAND2P61296 217 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 ICA1Q05084 483 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 TRDNQ13061 729 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.28e-9■■■■■ 32
SSR4-202ENST00000370085 AKNAD1Q5T1N1 836 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
SSR4-202ENST00000370085 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 STAG1Q8WVM7 1258 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 MS4A4AQ96JQ5 239 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 ZIC5Q96T25 663 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 CNNM2Q9H8M5 875 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 ZCCHC17Q9NP64 241 aaKnown RBP16.3■□□□□ 0.2
SSR4-202ENST00000370085 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 LAMA4Q16363 1823 aa16.3■□□□□ 0.2
SSR4-202ENST00000370085 PHIPQ8WWQ0 1821 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms