RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 EXOC7Q9UPT5 735 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 MX2P20592 715 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 SPECC1L-ADORA2AF8WAN1 911 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 GABPB1Q06547 395 aaPredicted RBP13.8□□□□□ -0.2
HCFC1-202ENST00000369984 MRPL44Q9H9J2 332 aaKnown RBP13.8□□□□□ -0.2
HCFC1-202ENST00000369984 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 GON4LQ3T8J9 2241 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 FLOT1O75955 427 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-202ENST00000369984 LLPHQ9BRT6 129 aaKnown RBP13.79□□□□□ -0.2
HCFC1-202ENST00000369984 VCX3AQ9NNX9 186 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 SOS1Q07889 1333 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-202ENST00000369984 MAEAQ7L5Y9 396 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 MRPL46Q9H2W6 279 aaKnown RBP13.79□□□□□ -0.2
HCFC1-202ENST00000369984 BAIAP2L1Q9UHR4 511 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 MAN1A1P33908 653 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 POSTNQ15063 836 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 RPS6KA2Q15349 733 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 TMTC1Q8IUR5 882 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 ZC3H12CQ9C0D7 883 aaKnown RBP13.79□□□□□ -0.2
HCFC1-202ENST00000369984 TBC1D7Q9P0N9 293 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 ANKFY1Q9P2R3 1169 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 FBLN1P23142 703 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 KRT12Q99456 494 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 NACA2Q9H009 215 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 NSMCE1Q8WV22 266 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 CBX8Q9HC52 389 aa13.79□□□□□ -0.2
HCFC1-202ENST00000369984 DDX41Q9UJV9 622 aaKnown RBP13.79□□□□□ -0.2
HCFC1-202ENST00000369984 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 NLRP12P59046 1061 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 RPS6KA1Q15418 735 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
HCFC1-202ENST00000369984 RGS16O15492 202 aaPredicted RBP13.78□□□□□ -0.2
HCFC1-202ENST00000369984 SLC12A2P55011 1212 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 CALCRLQ16602 461 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 MAP3K21Q5TCX8 1036 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 C17orf53Q8N3J3 647 aaPredicted RBP13.78□□□□□ -0.2
HCFC1-202ENST00000369984 MTX1Q13505 466 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
HCFC1-202ENST00000369984 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
HCFC1-202ENST00000369984 B4E1Z4 1266 aa13.77□□□□□ -0.2
HCFC1-202ENST00000369984 KRT71Q3SY84 523 aa13.77□□□□□ -0.2
HCFC1-202ENST00000369984 SFMBT2Q5VUG0 894 aa13.77□□□□□ -0.2
HCFC1-202ENST00000369984 DZIP3Q86Y13 1208 aaKnown RBP13.77□□□□□ -0.2
HCFC1-202ENST00000369984 RSAD2Q8WXG1 361 aa13.77□□□□□ -0.2
HCFC1-202ENST00000369984 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.2
HCFC1-202ENST00000369984 ABCC1P33527 1531 aa13.77□□□□□ -0.2
HCFC1-202ENST00000369984 FRMD3A2A2Y4 597 aa13.77□□□□□ -0.2
HCFC1-202ENST00000369984 WDR46O15213 610 aaKnown RBP13.77□□□□□ -0.2
HCFC1-202ENST00000369984 TRIM4Q9C037 500 aa13.77□□□□□ -0.2
HCFC1-202ENST00000369984 ARHGEF35A5YM69 484 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 CUTAO60888 179 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 RAD50Q92878 1312 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 ARHGAP42A6NI28 874 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 RIMBP2O15034 1052 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 AKAP4Q5JQC9 854 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 RBM26Q5T8P6 1007 aaKnown RBP13.77□□□□□ -0.21
HCFC1-202ENST00000369984 NXNQ6DKJ4 435 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.21
HCFC1-202ENST00000369984 MYO1AQ9UBC5 1043 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 ARHGAP6O43182 974 aa13.77□□□□□ -0.21
HCFC1-202ENST00000369984 TROVE2P10155 538 aaKnown RBP eCLIP13.77□□□□□ -0.21
HCFC1-202ENST00000369984 STX2P32856 288 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 MLKLQ8NB16 471 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 MYO10Q9HD67 2058 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 CD109Q6YHK3 1445 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 NOP56O00567 594 aaKnown RBP13.76□□□□□ -0.21
HCFC1-202ENST00000369984 SLC27A2O14975 620 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 PHBP35232 272 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 GUCY2FP51841 1108 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 MYCT1Q8N699 235 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 P3H4Q92791 437 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 FAF1Q9UNN5 650 aaPredicted RBP13.76□□□□□ -0.21
HCFC1-202ENST00000369984 MBD4O95243 580 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 TXKP42681 527 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
HCFC1-202ENST00000369984 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 VPS37BQ9H9H4 285 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 IRS4O14654 1257 aaPredicted RBP13.76□□□□□ -0.21
HCFC1-202ENST00000369984 CTNNA1P35221 906 aaKnown RBP13.76□□□□□ -0.21
HCFC1-202ENST00000369984 SESN3P58005 492 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 MYCBPQ99417 103 aaPredicted RBP13.76□□□□□ -0.21
HCFC1-202ENST00000369984 ANGEL1Q9UNK9 670 aaKnown RBP13.76□□□□□ -0.21
HCFC1-202ENST00000369984 CAPN7Q9Y6W3 813 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 RNF40O75150 1001 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 CPA1P15085 419 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 MAP3K7CLP57077 242 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 CCDC13Q8IYE1 715 aa13.76□□□□□ -0.21
HCFC1-202ENST00000369984 HAUS8Q9BT25 410 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms