RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ERLIN1O75477 346 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 CDKL5O76039 1030 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 CCDC57Q2TAC2 916 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 APTXQ7Z2E3 356 aaKnown RBP13.97□□□□□ -0.17
PHGDH-201ENST00000369407 GSPT2Q8IYD1 628 aaKnown RBP13.97□□□□□ -0.17
PHGDH-201ENST00000369407 EIF3CQ99613 913 aaKnown RBP13.97□□□□□ -0.17
PHGDH-201ENST00000369407 CTAGE15A4D2H0 777 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
PHGDH-201ENST00000369407 CTAGE8P0CG41 777 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 CABP4P57796 275 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 SSRP1Q08945 709 aaKnown RBP13.96□□□□□ -0.17
PHGDH-201ENST00000369407 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-201ENST00000369407 CTAGE6Q86UF2 777 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 CTAGE4Q8IX94 777 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 VPS16Q9H269 839 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 CABP5Q9NP86 173 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 GPR108Q9NPR9 543 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 IFIT3O14879 490 aaKnown RBP13.96□□□□□ -0.17
PHGDH-201ENST00000369407 CYP27B1O15528 508 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 SRGAP2O75044 1071 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 CHRM1P11229 460 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-201ENST00000369407 SARSP49591 514 aaKnown RBP13.96□□□□□ -0.17
PHGDH-201ENST00000369407 PLCD1P51178 756 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 ERVK-24P63145 666 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 THEMISQ8N1K5 641 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-201ENST00000369407 BANK1Q8NDB2 785 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 RAB21Q9UL25 225 aa13.96□□□□□ -0.17
PHGDH-201ENST00000369407 MFAP3LO75121 409 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 GYPCP04921 128 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-201ENST00000369407 MCAMP43121 646 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 MSANTD4Q8NCY6 345 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 FAM89AQ96GI7 184 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 CAPZA3Q96KX2 299 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 PANX2Q96RD6 677 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 LY9Q9HBG7 655 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 GUCA1BQ9UMX6 200 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 ACTN4O43707 911 aaKnown RBP13.95□□□□□ -0.18
PHGDH-201ENST00000369407 PTPREP23469 700 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 IGDCC4Q8TDY8 1250 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 HNRNPLLQ8WVV9 542 aaKnown RBP13.95□□□□□ -0.18
PHGDH-201ENST00000369407 MAPK8IP1Q9UQF2 711 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 PLEKHG2Q9H7P9 1386 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 USP5P45974 858 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 DPYDQ12882 1025 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 CHRNA2Q15822 529 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 NUP133Q8WUM0 1156 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 NAPGQ99747 312 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-201ENST00000369407 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 ZSWIM5Q9P217 1185 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 DACH1Q9UI36 760 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 SYNRGQ9UMZ2 1314 aa13.95□□□□□ -0.18
PHGDH-201ENST00000369407 MYO1BO43795 1136 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 IVLP07476 585 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 ZFYP08048 801 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-201ENST00000369407 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 PIH1D3Q9NQM4 214 aaKnown RBP13.94□□□□□ -0.18
PHGDH-201ENST00000369407 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 AFDNP55196 1824 aaKnown RBP13.94□□□□□ -0.18
PHGDH-201ENST00000369407 RNF40O75150 1001 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 SAFBQ15424 915 aaKnown RBP eCLIP13.94□□□□□ -0.18
PHGDH-201ENST00000369407 RASGRP2Q7LDG7 609 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
PHGDH-201ENST00000369407 NUP88Q99567 741 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-201ENST00000369407 CHP1Q99653 195 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 ADD3Q9UEY8 706 aaKnown RBP13.94□□□□□ -0.18
PHGDH-201ENST00000369407 CTNND2Q9UQB3 1225 aa13.94□□□□□ -0.18
PHGDH-201ENST00000369407 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-201ENST00000369407 ICE2Q659A1 982 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 IQUBQ8NA54 791 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 TAB2Q9NYJ8 693 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 MMP1P03956 469 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 MRPS25P82663 173 aaKnown RBP13.93□□□□□ -0.18
PHGDH-201ENST00000369407 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 PES1O00541 588 aaKnown RBP13.93□□□□□ -0.18
PHGDH-201ENST00000369407 N4BP3O15049 544 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
PHGDH-201ENST00000369407 WNT7AO00755 349 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 ARHGAP25P42331 645 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 NOM1Q5C9Z4 860 aaKnown RBP13.92□□□□□ -0.18
PHGDH-201ENST00000369407 EARS2Q5JPH6 523 aaKnown RBP13.92□□□□□ -0.18
PHGDH-201ENST00000369407 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 GOLGA6L1Q8N7Z2 621 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 MYO6Q9UM54 1294 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 OVOS2A0A0G2JMS6 1433 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 PRDM1O75626 825 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 EHD4Q9H223 541 aa13.92□□□□□ -0.18
PHGDH-201ENST00000369407 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 SNAP23O00161 211 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 ADD2P35612 726 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 TTC19Q6DKK2 380 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-201ENST00000369407 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 MYCBPQ99417 103 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms