RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CYP4F22Q6NT55 531 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 LAMB2P55268 1798 aa10.62□□□□□ -0.71
TPM3-213ENST00000368545 CDHR2Q9BYE9 1310 aa10.62□□□□□ -0.71
TPM3-213ENST00000368545 PRPF40AO75400 957 aaKnown RBP10.62□□□□□ -0.71
TPM3-213ENST00000368545 IGHA2P01877 340 aa10.62□□□□□ -0.71
TPM3-213ENST00000368545 MX1P20591 662 aa10.62□□□□□ -0.71
TPM3-213ENST00000368545 PDE1AP54750 535 aa10.62□□□□□ -0.71
TPM3-213ENST00000368545 FANCCQ00597 558 aa10.62□□□□□ -0.71
TPM3-213ENST00000368545 G3BP1Q13283 466 aaKnown RBP eCLIP10.62□□□□□ -0.711e-6■■■□□ 15.5
TPM3-213ENST00000368545 ZBTB38Q8NAP3 1195 aaPredicted RBP10.62□□□□□ -0.71
TPM3-213ENST00000368545 PRKD2Q9BZL6 878 aa10.62□□□□□ -0.71
TPM3-213ENST00000368545 TLL1O43897 1013 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
TPM3-213ENST00000368545 GSPT1P15170 499 aaKnown RBP10.61□□□□□ -0.71
TPM3-213ENST00000368545 RAB15P59190 212 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 PLCB3Q01970 1234 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 HLFQ16534 295 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 EPHA10Q5JZY3 1008 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 TMC4Q7Z404 712 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 CLASRPQ8N2M8 674 aaKnown RBP10.61□□□□□ -0.71
TPM3-213ENST00000368545 SLC17A8Q8NDX2 589 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 PLA2G12BQ9BX93 195 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 VPS33BQ9H267 617 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 STAP2Q9UGK3 403 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 FZD6O60353 706 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 FOXO4P98177 505 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 NLRP10Q86W26 655 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 OTUD7AQ8TE49 926 aaPredicted RBP10.61□□□□□ -0.71
TPM3-213ENST00000368545 SETDB2Q96T68 719 aa10.61□□□□□ -0.71
TPM3-213ENST00000368545 FZD9O00144 591 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 CDC45O75419 566 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 EIF1AXP47813 144 aaKnown RBP10.6□□□□□ -0.71
TPM3-213ENST00000368545 EIF6P56537 245 aaKnown RBP10.6□□□□□ -0.71
TPM3-213ENST00000368545 SMIM5Q71RC9 77 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 PA2G4Q9UQ80 394 aaKnown RBP10.6□□□□□ -0.71
TPM3-213ENST00000368545 GPR182O15218 404 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 SORBS3O60504 671 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 CAMTA2O94983 1202 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 MYCP01106 439 aaPredicted RBP10.6□□□□□ -0.71
TPM3-213ENST00000368545 RFX5P48382 616 aaPredicted RBP10.6□□□□□ -0.71
TPM3-213ENST00000368545 PARP10Q53GL7 1025 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 CASC1Q6TDU7 716 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 LMBR1LQ6UX01 489 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 SAPCD2Q86UD0 394 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 ZNF34Q8IZ26 560 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 MASTLQ96GX5 879 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 GPATCH3Q96I76 525 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 CITED4Q96RK1 184 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 IL1RAPL2Q9NP60 686 aa10.6□□□□□ -0.71
TPM3-213ENST00000368545 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
TPM3-213ENST00000368545 DAB2P98082 770 aa10.59□□□□□ -0.71
TPM3-213ENST00000368545 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
TPM3-213ENST00000368545 C16orf46Q6P387 395 aa10.59□□□□□ -0.71
TPM3-213ENST00000368545 ADGRD1Q6QNK2 874 aa10.59□□□□□ -0.71
TPM3-213ENST00000368545 PRKAG2Q9UGJ0 569 aa10.59□□□□□ -0.71
TPM3-213ENST00000368545 PDE4DIPQ5VU43 2346 aa10.59□□□□□ -0.71
TPM3-213ENST00000368545 NFIXQ14938 502 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 MAP1SQ66K74 1059 aaPredicted RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 FBXO46Q6PJ61 603 aaPredicted RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 DHX38Q92620 1227 aaKnown RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 JARID2Q92833 1246 aaPredicted RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 RNF34Q969K3 372 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 TSPAN10Q9H1Z9 355 aaPredicted RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 CHMP3Q9Y3E7 222 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 HRO43593 1189 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 GPTP24298 496 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 SCNN1DP51172 638 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.722e-15■□□□□ 10.2
TPM3-213ENST00000368545 TGIF2Q9GZN2 237 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 VTI1BQ9UEU0 232 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 PGAP2Q9UHJ9 254 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.72
TPM3-213ENST00000368545 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
TPM3-213ENST00000368545 ERC2O15083 957 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 SASH1O94885 1247 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 SDSP20132 328 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 PSMD2Q13200 908 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 BICDL1Q6ZP65 573 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 JDP2Q8WYK2 163 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 FAM89AQ96GI7 184 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 DMRTB1Q96MA1 342 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 SIL1Q9H173 461 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 ACBD3Q9H3P7 528 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 CAPN10Q9HC96 672 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 METTL5Q9NRN9 209 aaKnown RBP10.57□□□□□ -0.72
TPM3-213ENST00000368545 PDE8AO60658 829 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 CIAO1O76071 339 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 CSF1RP07333 972 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 EPHA4P54764 986 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 ST5P78524 1137 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 CCDC57Q2TAC2 916 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms