RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ESPNB1AK53 854 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 CPLX4Q7Z7G2 160 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 TTC25Q96NG3 672 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 TBC1D8O95759 1140 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 P4HA1P13674 534 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 SOX5P35711 763 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 SLC9C2Q5TAH2 1124 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 METTL23Q86XA0 190 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 DNAAF4Q8WXU2 420 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 LZICQ8WZA0 190 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 HOOK2Q96ED9 719 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 CDCA7LQ96GN5 454 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 VCXQ9H320 206 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 NEUROD4Q9HD90 331 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 GGA1Q9UJY5 639 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 CPSF3Q9UKF6 684 aaKnown RBP6.43□□□□□ -1.38
BRCA1-203ENST00000357654 CENPAP49450 140 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 HIF1AQ16665 826 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 ACCSLQ4AC99 568 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 USP21Q9UK80 565 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 ZHX1Q9UKY1 873 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-203ENST00000357654 EXOC7Q9UPT5 735 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 GNGT2O14610 69 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 PFDN6O15212 129 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 ALAS1P13196 640 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 ZNF75DP51815 510 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 COG7P83436 770 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 CCDC102BQ68D86 513 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 GPR161Q8N6U8 529 aaKnown RBP6.43□□□□□ -1.38
BRCA1-203ENST00000357654 VCX3BQ9H321 246 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 AS3MTQ9HBK9 375 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 TSHZ2Q9NRE2 1034 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 RSPH14Q9UHP6 348 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 DOK7Q18PE1 504 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 RAPH1Q70E73 1250 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 CTAGE3PQ8IX95 158 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 VPS18Q9P253 973 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 MTRF1LQ9UGC7 380 aaKnown RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 GUCA1BQ9UMX6 200 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 GSTA4O15217 222 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ATF7P17544 494 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 SYKP43405 635 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 CCDC121Q6ZUS5 278 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ZNF365Q70YC5 407 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 CTAGE6Q86UF2 777 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 MGARPQ8TDB4 240 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 NKIRAS1Q9NYS0 192 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 TEKT2Q9UIF3 430 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 PSMA7O14818 248 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 SPTLC2O15270 562 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 PLCG2P16885 1265 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 OSBPP22059 807 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 HPDP32754 393 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 PDCD2Q16342 344 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 MFSD4BQ5TF39 518 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 DDX53Q86TM3 631 aaKnown RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 TTC1Q99614 292 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 SCHIP1Q9P0W5 487 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 A0A1B0GUL7 405 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 PPFIA2O75334 1257 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ANXA13P27216 316 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 EXT2Q93063 718 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 TRAF5O00463 557 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 GCNT3O95395 438 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ADCY1Q08828 1119 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 NSUN2Q08J23 767 aaKnown RBP eCLIP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 SNW1Q13573 536 aaKnown RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ZNF174Q15697 407 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 GBP6Q6ZN66 633 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 RSAD2Q8WXG1 361 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ATP6V0A1Q93050 837 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 PYM1Q9BRP8 204 aaKnown RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 VPS37BQ9H9H4 285 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 EFCC1Q9HA90 598 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 KRT82Q9NSB4 513 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 KAT6BQ8WYB5 2073 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 I3L4J1 428 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 STAM2O75886 525 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 DDHD2O94830 711 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ZNF165P49910 485 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 UBASH3AP57075 661 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 ARHGAP44Q17R89 818 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 KRT27Q7Z3Y8 459 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 PDCD6IPQ8WUM4 868 aaKnown RBP6.42□□□□□ -1.38
BRCA1-203ENST00000357654 BTG4Q9NY30 223 aa6.42□□□□□ -1.38
BRCA1-203ENST00000357654 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
BRCA1-203ENST00000357654 MCM5P33992 734 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 CAPZA2P47755 286 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 TPH2Q8IWU9 490 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 ADPGKQ9BRR6 497 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 ZNF277Q9NRM2 450 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-203ENST00000357654 SAMD15Q9P1V8 674 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 GOLGA8CPA6NN73 597 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 SERPIND1P05546 499 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 MYL1P05976 194 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 HLA-DPA1P20036 260 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 PRKCQQ04759 706 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 MMEL1Q495T6 779 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 MTERF4Q7Z6M4 381 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms