RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 GPATCH11Q8N954 259 aa17.24■□□□□ 0.35
STRN3-201ENST00000355683 ZBTB38Q8NAP3 1195 aaPredicted RBP17.24■□□□□ 0.35
STRN3-201ENST00000355683 TTLL11Q8NHH1 800 aa17.24■□□□□ 0.35
STRN3-201ENST00000355683 ZNF274Q96GC6 653 aaPredicted RBP17.24■□□□□ 0.35
STRN3-201ENST00000355683 ARFGAP3Q9NP61 516 aa17.24■□□□□ 0.35
STRN3-201ENST00000355683 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
STRN3-201ENST00000355683 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
STRN3-201ENST00000355683 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
STRN3-201ENST00000355683 MYOM1P52179 1685 aa17.24■□□□□ 0.35
STRN3-201ENST00000355683 FOXO4P98177 505 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 LPIN2Q92539 896 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 AFF2P51816 1311 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 CSRNP2Q9H175 543 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
STRN3-201ENST00000355683 ODF2Q5BJF6 829 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 ZNF397Q8NF99 534 aaPredicted RBP17.23■□□□□ 0.35
STRN3-201ENST00000355683 PLCD4Q9BRC7 762 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
STRN3-201ENST00000355683 NEDD4P46934 1319 aa17.23■□□□□ 0.35
STRN3-201ENST00000355683 NLRP10Q86W26 655 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
STRN3-201ENST00000355683 CYP2D6P10635 497 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 RFC4P35249 363 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 TXKP42681 527 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 CHRNDQ07001 517 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 NOSTRINQ8IVI9 506 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 NEK11Q8NG66 645 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 H7C1W4 665 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 KRT2P35908 639 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 TFAP4Q01664 338 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 PDE4BQ07343 736 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 PLS1Q14651 629 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 TAX1BP1Q86VP1 789 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
STRN3-201ENST00000355683 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 TGFBRAP1Q8WUH2 860 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 DYNLL2Q96FJ2 89 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 VPS18Q9P253 973 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
STRN3-201ENST00000355683 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
STRN3-201ENST00000355683 KCNQ2O43526 872 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 AKR1B10O60218 316 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 ECM2O94769 699 aaPredicted RBP17.21■□□□□ 0.35
STRN3-201ENST00000355683 PPP2R3AQ06190 1150 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 SUSD4Q5VX71 490 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 PLEKHA8P1O95397 391 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 PPARAQ07869 468 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.35
STRN3-201ENST00000355683 OGFRQ9NZT2 677 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 PKD2L1Q9P0L9 805 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 BCCIPQ9P287 314 aaKnown RBP eCLIP17.21■□□□□ 0.35
STRN3-201ENST00000355683 TCEAL9Q9UHQ7 104 aa17.21■□□□□ 0.35
STRN3-201ENST00000355683 KRT9P35527 623 aa17.21■□□□□ 0.34
STRN3-201ENST00000355683 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.34
STRN3-201ENST00000355683 GTPBP4Q9BZE4 634 aaKnown RBP17.21■□□□□ 0.34
STRN3-201ENST00000355683 SRP68Q9UHB9 627 aaKnown RBP17.21■□□□□ 0.34
STRN3-201ENST00000355683 JCADQ9P266 1359 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 CAVIN2O95810 425 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
STRN3-201ENST00000355683 TCP10Q12799 353 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 MTF1Q14872 753 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
STRN3-201ENST00000355683 TCP11L1Q9NUJ3 509 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 CAPN2P17655 700 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 PTGDRQ13258 359 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
STRN3-201ENST00000355683 CNNM2Q9H8M5 875 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 ZNF76P36508 570 aa17.2■□□□□ 0.34
STRN3-201ENST00000355683 ATP2C2O75185 946 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 KIAA0754O94854 1291 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 YEATS4O95619 227 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 CCDC175P0C221 793 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 RDXP35241 583 aaKnown RBP17.19■□□□□ 0.34
STRN3-201ENST00000355683 INF2Q27J81 1249 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
STRN3-201ENST00000355683 SOWAHDA6NJG2 315 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 PRPF4BQ13523 1007 aaKnown RBP17.19■□□□□ 0.34
STRN3-201ENST00000355683 FBXO38Q6PIJ6 1188 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 SLC44A5Q8NCS7 719 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 PPP1R13BQ96KQ4 1090 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
STRN3-201ENST00000355683 ADD2P35612 726 aa17.18■□□□□ 0.34
STRN3-201ENST00000355683 KRBA2Q6ZNG9 492 aa17.18■□□□□ 0.34
STRN3-201ENST00000355683 KSR1Q8IVT5 923 aa17.18■□□□□ 0.34
STRN3-201ENST00000355683 SYMPKQ92797 1274 aaKnown RBP17.18■□□□□ 0.34
STRN3-201ENST00000355683 BMP2KQ9NSY1 1161 aaPredicted RBP17.18■□□□□ 0.34
STRN3-201ENST00000355683 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
STRN3-201ENST00000355683 USP8P40818 1118 aa17.18■□□□□ 0.34
STRN3-201ENST00000355683 NOP2P46087 812 aaKnown RBP17.18■□□□□ 0.34
STRN3-201ENST00000355683 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
STRN3-201ENST00000355683 AKR1B15C9JRZ8 316 aaPredicted RBP17.18■□□□□ 0.34
STRN3-201ENST00000355683 SLC39A14Q15043 492 aa17.18■□□□□ 0.34
STRN3-201ENST00000355683 SPA17Q15506 151 aa17.18■□□□□ 0.34
STRN3-201ENST00000355683 CT47A1Q5JQC4 288 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms