RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PRPF3O43395 683 aaKnown RBP19.29■□□□□ 0.68
SAMM50-201ENST00000350028 ZNF165P49910 485 aa19.29■□□□□ 0.68
SAMM50-201ENST00000350028 NDUFA8P51970 172 aa19.29■□□□□ 0.68
SAMM50-201ENST00000350028 DEFB132Q7Z7B7 95 aa19.29■□□□□ 0.68
SAMM50-201ENST00000350028 MAP3K14Q99558 947 aa19.29■□□□□ 0.68
SAMM50-201ENST00000350028 MCM9Q9NXL9 1143 aa19.29■□□□□ 0.68
SAMM50-201ENST00000350028 MKRN1Q9UHC7 482 aaKnown RBP19.29■□□□□ 0.68
SAMM50-201ENST00000350028 UBE2Q2LH0YL09 131 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 ZNF500O60304 480 aaPredicted RBP19.28■□□□□ 0.68
SAMM50-201ENST00000350028 XBP1P17861 261 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 USP5P45974 858 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 PLCB2Q00722 1185 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 LUZP1Q86V48 1076 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 DIS3L2Q8IYB7 885 aaKnown RBP19.28■□□□□ 0.68
SAMM50-201ENST00000350028 SDF4Q9BRK5 362 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 DNAJC25Q9H1X3 360 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.28■□□□□ 0.68
SAMM50-201ENST00000350028 ANO10Q9NW15 660 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 MYH6P13533 1939 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 AP5Z1O43299 807 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 CYP2D6P10635 497 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 TROAPQ12815 778 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 ZNF827Q17R98 1081 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 C12orf60Q5U649 245 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 SLC51AQ86UW1 340 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 AMOTL1Q8IY63 956 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 CCDC82Q8N4S0 544 aa19.28■□□□□ 0.68
SAMM50-201ENST00000350028 BTBD18B2RXH4 712 aa19.27■□□□□ 0.68
SAMM50-201ENST00000350028 CUTAO60888 179 aa19.27■□□□□ 0.68
SAMM50-201ENST00000350028 WDHD1O75717 1129 aaPredicted RBP19.27■□□□□ 0.68
SAMM50-201ENST00000350028 FUT2Q10981 343 aa19.27■□□□□ 0.68
SAMM50-201ENST00000350028 RILPL1Q5EBL4 403 aa19.27■□□□□ 0.68
SAMM50-201ENST00000350028 TIGD1Q96MW7 591 aa19.27■□□□□ 0.68
SAMM50-201ENST00000350028 GPR101Q96P66 508 aaPredicted RBP19.27■□□□□ 0.68
SAMM50-201ENST00000350028 TAOK2Q9UL54 1235 aa19.27■□□□□ 0.68
SAMM50-201ENST00000350028 KCNJ14Q9UNX9 436 aa19.27■□□□□ 0.68
SAMM50-201ENST00000350028 MROH7-TTC4A0A0A0MT08 1334 aa19.27■□□□□ 0.67
SAMM50-201ENST00000350028 FAM237AA0A1B0GTK4 181 aa19.26■□□□□ 0.67
SAMM50-201ENST00000350028 ZNF202O95125 648 aa19.26■□□□□ 0.67
SAMM50-201ENST00000350028 TPM3P06753 285 aa19.26■□□□□ 0.67
SAMM50-201ENST00000350028 USP17L8P0C7I0 530 aa19.26■□□□□ 0.67
SAMM50-201ENST00000350028 CCDC178Q5BJE1 867 aa19.26■□□□□ 0.67
SAMM50-201ENST00000350028 SP8Q8IXZ3 490 aa19.26■□□□□ 0.67
SAMM50-201ENST00000350028 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
SAMM50-201ENST00000350028 TBC1D16Q8TBP0 767 aa19.26■□□□□ 0.67
SAMM50-201ENST00000350028 SH3RF3Q8TEJ3 882 aaPredicted RBP19.26■□□□□ 0.67
SAMM50-201ENST00000350028 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 PFKFB1P16118 471 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 MARCKSP29966 332 aaPredicted RBP19.25■□□□□ 0.67
SAMM50-201ENST00000350028 SLF2Q8IX21 1173 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 NLGN1Q8N2Q7 840 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 CTCFLQ8NI51 663 aaPredicted RBP19.25■□□□□ 0.67
SAMM50-201ENST00000350028 TBC1D22AQ8WUA7 517 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 AKT1S1Q96B36 256 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 ROBO3Q96MS0 1386 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 EVX2Q03828 476 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 IQCB1Q15051 598 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 GRIK5Q16478 980 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 FAM47AQ5JRC9 791 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 TMTC3Q6ZXV5 915 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 KIAA1468Q9P260 1216 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 LRRC37AA6NMS7 1700 aa19.25■□□□□ 0.67
SAMM50-201ENST00000350028 GOLGA6L6A8MZA4 724 aa19.24■□□□□ 0.67
SAMM50-201ENST00000350028 DIXDC1Q155Q3 683 aa19.24■□□□□ 0.67
SAMM50-201ENST00000350028 PKN1Q16512 942 aa19.24■□□□□ 0.67
SAMM50-201ENST00000350028 DGKHQ86XP1 1220 aa19.24■□□□□ 0.67
SAMM50-201ENST00000350028 ANKS1AQ92625 1134 aa19.24■□□□□ 0.67
SAMM50-201ENST00000350028 FAM163AQ96GL9 167 aaPredicted RBP19.24■□□□□ 0.67
SAMM50-201ENST00000350028 RTFDC1Q9BY42 306 aaPredicted RBP19.24■□□□□ 0.67
SAMM50-201ENST00000350028 POLLQ9UGP5 575 aa19.24■□□□□ 0.67
SAMM50-201ENST00000350028 HPSEQ9Y251 543 aa19.24■□□□□ 0.67
SAMM50-201ENST00000350028 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.24■□□□□ 0.67
SAMM50-201ENST00000350028 GPR75-ASB3A0A0A6YYF3 556 aa19.23■□□□□ 0.67
SAMM50-201ENST00000350028 GOLGA6L19H0YKK7 550 aa19.23■□□□□ 0.67
SAMM50-201ENST00000350028 PLCG2P16885 1265 aa19.23■□□□□ 0.67
SAMM50-201ENST00000350028 RESP18Q5W5W9 173 aa19.23■□□□□ 0.67
SAMM50-201ENST00000350028 NAT10Q9H0A0 1025 aaKnown RBP19.23■□□□□ 0.67
SAMM50-201ENST00000350028 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
SAMM50-201ENST00000350028 V9GY48 417 aaPredicted RBP19.23■□□□□ 0.67
SAMM50-201ENST00000350028 FAM205AQ6ZU69 1335 aa19.23■□□□□ 0.67
SAMM50-201ENST00000350028 PPEF1O14829 653 aaPredicted RBP19.22■□□□□ 0.67
SAMM50-201ENST00000350028 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 SYKP43405 635 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 TOB1P50616 345 aaPredicted RBP19.22■□□□□ 0.67
SAMM50-201ENST00000350028 SHC4Q6S5L8 630 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 C11orf57Q6ZUT1 292 aaPredicted RBP19.22■□□□□ 0.67
SAMM50-201ENST00000350028 CEP57L1Q8IYX8 460 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 KRI1Q8N9T8 703 aaKnown RBP19.22■□□□□ 0.67
SAMM50-201ENST00000350028 NAV1Q8NEY1 1877 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 FLAD1Q8NFF5 587 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 TGFBRAP1Q8WUH2 860 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 PHF20Q9BVI0 1012 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 CEP131Q9UPN4 1083 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 C6orf229H3BNL8 230 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 KIF5BP33176 963 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 TFAP4Q01664 338 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 ZRSR1Q15695 479 aaKnown RBP19.22■□□□□ 0.67
SAMM50-201ENST00000350028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.22■□□□□ 0.67
SAMM50-201ENST00000350028 MKNK2Q9HBH9 465 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 ZNF287Q9HBT7 754 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms