RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 AP1ARQ63HQ0 302 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 DSCC1Q9BVC3 393 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 NUCKS1Q9H1E3 243 aaKnown RBP19.43■□□□□ 0.7
SPAST-202ENST00000345662 SHANK2Q9UPX8 1470 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 HIP1RO75146 1068 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 DENND2CQ68D51 928 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 TYW1BQ6NUM6 668 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 SYCE1Q8N0S2 351 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 RNF40O75150 1001 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 TCP1P17987 556 aaKnown RBP19.43■□□□□ 0.7
SPAST-202ENST00000345662 TRAF1Q13077 416 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 V9GY48 417 aaPredicted RBP19.43■□□□□ 0.7
SPAST-202ENST00000345662 ABCC2Q92887 1545 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 ZNF521Q96K83 1311 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 EYA2O00167 538 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 GPAA1O43292 621 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 RASSF2P50749 326 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 NDUFA8P51970 172 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 SF3A3Q12874 501 aaKnown RBP eCLIP19.42■□□□□ 0.7
SPAST-202ENST00000345662 MAP7D1Q3KQU3 841 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 CCDC62Q6P9F0 684 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 KLHDC4Q8TBB5 520 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 STK38LQ9Y2H1 464 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 KIAA0232Q92628 1395 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 A0A1W2PQ27 194 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 A0A1W2PQ64 194 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 A0A1W2PQD8 194 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 PNMA6AP0CW24 399 aaPredicted RBP19.42■□□□□ 0.7
SPAST-202ENST00000345662 KLHL30Q0D2K2 578 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 ZNF526Q8TF50 670 aaPredicted RBP19.42■□□□□ 0.7
SPAST-202ENST00000345662 RAB17Q9H0T7 212 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 RGS16O15492 202 aaPredicted RBP19.42■□□□□ 0.7
SPAST-202ENST00000345662 ZNF365Q70YC5 407 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 SYCP2Q9BX26 1530 aa19.42■□□□□ 0.7
SPAST-202ENST00000345662 CCDC170Q8IYT3 715 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 SSH3Q8TE77 659 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 KCNJ18B7U540 433 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 CETN3O15182 167 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 KCNJ12Q14500 433 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 PEX26Q7Z412 305 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 CFAP157Q5JU67 520 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 SFMBT2Q5VUG0 894 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 FLOT1O75955 427 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 PHLDB2Q86SQ0 1253 aa19.41■□□□□ 0.7
SPAST-202ENST00000345662 ERCC5P28715 1186 aaPredicted RBP19.4■□□□□ 0.7
SPAST-202ENST00000345662 PPP2R5BQ15173 497 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 INF2Q27J81 1249 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 VPS52Q8N1B4 723 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.4■□□□□ 0.7
SPAST-202ENST00000345662 ARID4AP29374 1257 aaPredicted RBP19.4■□□□□ 0.7
SPAST-202ENST00000345662 C11orf57Q6ZUT1 292 aaPredicted RBP19.4■□□□□ 0.7
SPAST-202ENST00000345662 STAMQ92783 540 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 RAB3IPQ96QF0 476 aaPredicted RBP19.4■□□□□ 0.7
SPAST-202ENST00000345662 MYO1AQ9UBC5 1043 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 NSFL1CQ9UNZ2 370 aaKnown RBP19.4■□□□□ 0.7
SPAST-202ENST00000345662 HHATQ5VTY9 493 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 RRAGAQ7L523 313 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 PARD6BQ9BYG5 372 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 IMPG2Q9BZV3 1241 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 OSBPL3Q9H4L5 887 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 MCM9Q9NXL9 1143 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 PDLIM2Q96JY6 352 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 BLZF1Q9H2G9 400 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 ASIC3Q9UHC3 531 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 KCNJ14Q9UNX9 436 aa19.4■□□□□ 0.7
SPAST-202ENST00000345662 TBC1D31Q96DN5 1066 aa19.39■□□□□ 0.7
SPAST-202ENST00000345662 PLEKHA4Q9H4M7 779 aa19.39■□□□□ 0.7
SPAST-202ENST00000345662 FAM207AQ9NSI2 230 aaPredicted RBP19.39■□□□□ 0.7
SPAST-202ENST00000345662 COMMD10Q9Y6G5 202 aa19.39■□□□□ 0.7
SPAST-202ENST00000345662 DNMT1P26358 1616 aaKnown RBP19.39■□□□□ 0.7
SPAST-202ENST00000345662 IKBKBO14920 756 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 RPGRQ92834 1020 aaKnown RBP19.39■□□□□ 0.69
SPAST-202ENST00000345662 GBP5Q96PP8 586 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 HOMER3Q9NSC5 361 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 TXNDC16Q9P2K2 825 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 FRMD4BQ9Y2L6 1034 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 EPN1Q9Y6I3 576 aaPredicted RBP19.39■□□□□ 0.69
SPAST-202ENST00000345662 ATP10BO94823 1461 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 UAP1Q16222 522 aaPredicted RBP19.39■□□□□ 0.69
SPAST-202ENST00000345662 SPATA1Q5VX52 437 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 SLC35F6Q8N357 371 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 RAB3IL1Q8TBN0 382 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 MYO1CO00159 1063 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 LUC7L3O95232 432 aaKnown RBP19.39■□□□□ 0.69
SPAST-202ENST00000345662 ATP5JP18859 108 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 PEX19P40855 299 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 PSMC4P43686 418 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 MYL10Q9BUA6 226 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 LSG1Q9H089 658 aaKnown RBP19.39■□□□□ 0.69
SPAST-202ENST00000345662 KLHL14Q9P2G3 628 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 PARP2Q9UGN5 583 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 KDM5DQ9BY66 1539 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 MORC3Q14149 939 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 MUM1Q2TAK8 710 aa19.39■□□□□ 0.69
SPAST-202ENST00000345662 DNM2P50570 870 aa19.38■□□□□ 0.69
SPAST-202ENST00000345662 KRT28Q7Z3Y7 464 aa19.38■□□□□ 0.69
SPAST-202ENST00000345662 NAP1L4Q99733 375 aaKnown RBP19.38■□□□□ 0.69
SPAST-202ENST00000345662 A0A0D9SFI3 127 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms