RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KRT23Q9C075 422 aa16.4■□□□□ 0.22
CPSF7-201ENST00000340437 DACH1Q9UI36 760 aa16.4■□□□□ 0.22
CPSF7-201ENST00000340437 AKR1B15C9JRZ8 316 aaPredicted RBP16.4■□□□□ 0.22
CPSF7-201ENST00000340437 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
CPSF7-201ENST00000340437 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
CPSF7-201ENST00000340437 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
CPSF7-201ENST00000340437 PDE8AO60658 829 aa16.4■□□□□ 0.22
CPSF7-201ENST00000340437 IFNAR1P17181 557 aa16.4■□□□□ 0.22
CPSF7-201ENST00000340437 ARFGEF2Q9Y6D5 1785 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 TRIM75PA6NK02 468 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 PTPREP23469 700 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 ST5P78524 1137 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 WWC2Q6AWC2 1192 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 CRACR2BQ8N4Y2 399 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-201ENST00000340437 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 MLKLQ8NB16 471 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 ARFGAP3Q9NP61 516 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 EFCAB8A8MWE9 144 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 PHACTR2O75167 634 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 DEXIO95424 95 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 CASP14P31944 242 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 ACRBPQ8NEB7 543 aa16.39■□□□□ 0.21
CPSF7-201ENST00000340437 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
CPSF7-201ENST00000340437 SASH3O75995 380 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 PLEKHA8P1O95397 391 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 CCDC175P0C221 793 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 RRAGBQ5VZM2 374 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 TMEM139Q8IV31 216 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 MED15Q96RN5 788 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 HINFPQ9BQA5 517 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 TNKSO95271 1327 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 A0A087X0B3 334 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 N4BP3O15049 544 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 GYG1P46976 350 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 CDC5LQ99459 802 aaKnown RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 TCRBV5S4A2TA0A5A2 114 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 WNT7AO00755 349 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 MCM7P33993 719 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 MDM2Q00987 491 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-201ENST00000340437 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
CPSF7-201ENST00000340437 SCN11AQ9UI33 1791 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 KIF5CO60282 957 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 STX10O60499 249 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
CPSF7-201ENST00000340437 FILIP1LQ4L180 1135 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 RAD9BQ6WBX8 426 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 ABL1P00519 1130 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 XBP1P17861 261 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 LIFRP42702 1097 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 PPARAQ07869 468 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 SRRTQ9BXP5 876 aaKnown RBP16.37■□□□□ 0.21
CPSF7-201ENST00000340437 TAB2Q9NYJ8 693 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 SYNRGQ9UMZ2 1314 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 LMAN1P49257 510 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 CEP131Q9UPN4 1083 aa16.37■□□□□ 0.21
CPSF7-201ENST00000340437 RIC1Q4ADV7 1423 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 NMT2O60551 498 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 HNRNPH2P55795 449 aaKnown RBP16.36■□□□□ 0.21
CPSF7-201ENST00000340437 EVX2Q03828 476 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 MORC3Q14149 939 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 FAM47AQ5JRC9 791 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
CPSF7-201ENST00000340437 ENOX1Q8TC92 643 aaKnown RBP16.36■□□□□ 0.21
CPSF7-201ENST00000340437 SUGCTQ9HAC7 445 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 KCND1Q9NSA2 647 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 BTG4Q9NY30 223 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 SUSD4Q5VX71 490 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 CC2D1AQ6P1N0 951 aaPredicted RBP16.36■□□□□ 0.21
CPSF7-201ENST00000340437 BRINP3Q76B58 766 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 GOLGA1Q92805 767 aa16.36■□□□□ 0.21
CPSF7-201ENST00000340437 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
CPSF7-201ENST00000340437 IGHMBP2P38935 993 aaKnown RBP16.35■□□□□ 0.21
CPSF7-201ENST00000340437 PLCD1P51178 756 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 PIK3AP1Q6ZUJ8 805 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 TPM1P09493 284 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 CHMP4BP1P59074 171 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
CPSF7-201ENST00000340437 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 SLF1Q9BQI6 1058 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 SRPRBQ9Y5M8 271 aaKnown RBP16.35■□□□□ 0.21
CPSF7-201ENST00000340437 ACTN4O43707 911 aaKnown RBP16.35■□□□□ 0.21
CPSF7-201ENST00000340437 ADGRA1Q86SQ6 560 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 PAGE5Q96GU1 130 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 WDR19Q8NEZ3 1342 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 ABCC6O95255 1503 aa16.35■□□□□ 0.21
CPSF7-201ENST00000340437 KRT2P35908 639 aa16.34■□□□□ 0.21
CPSF7-201ENST00000340437 MAP3K9P80192 1104 aa16.34■□□□□ 0.21
CPSF7-201ENST00000340437 GDAP1L1Q96MZ0 367 aa16.34■□□□□ 0.21
CPSF7-201ENST00000340437 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms