RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 TRIM29Q14134 588 aa13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 EARS2Q5JPH6 523 aaKnown RBP13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 IQSEC3Q9UPP2 1182 aaPredicted RBP13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 MRFAP1Q9Y605 127 aa13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 PRDM1O75626 825 aa13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 CD44P16070 742 aaKnown RBP13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 NOSTRINQ8IVI9 506 aa13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 EPSTI1Q96J88 318 aa13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 ARGLU1Q9NWB6 273 aaPredicted RBP13.67□□□□□ -0.22
CCDC144CP-201ENST00000340196 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 MBD4O95243 580 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 SPECC1LQ69YQ0 1117 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 JMYQ8N9B5 988 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 MIGA1Q8NAN2 632 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 TMOD3Q9NYL9 352 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 FBXO2Q9UK22 296 aaPredicted RBP13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 SLC12A7Q9Y666 1083 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 CUTAO60888 179 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 N4BP1O75113 896 aaKnown RBP13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 AIDAQ96BJ3 306 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 ISCA1Q9BUE6 129 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 CSRNP2Q9H175 543 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 AKAP2Q9Y2D5 859 aa13.66□□□□□ -0.22
CCDC144CP-201ENST00000340196 ZNF18P17022 549 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 RBL2Q08999 1139 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 MAGEB6Q8N7X4 407 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 ACRBPQ8NEB7 543 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 TTLL11Q8NHH1 800 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 CDC5LQ99459 802 aaKnown RBP13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 RIPOR2Q9Y4F9 1068 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 BCL9O00512 1426 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 MCM6Q14566 821 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 PIGBQ92521 554 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 RAI14Q9P0K7 980 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 TFR2Q9UP52 801 aa13.65□□□□□ -0.22
CCDC144CP-201ENST00000340196 CCT6AP40227 531 aaKnown RBP13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 DPYDQ12882 1025 aa13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 PNKPQ96T60 521 aa13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 FUT8Q9BYC5 575 aa13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 RHOXF2BP0C7M4 288 aa13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 RSRC2Q7L4I2 434 aaKnown RBP13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 RHOXF2Q9BQY4 288 aa13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC144CP-201ENST00000340196 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 MMP1P03956 469 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 RAD51AP2Q09MP3 1159 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 CPLX2Q6PUV4 134 aaKnown RBP13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 NAPBQ9H115 298 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 VPS54Q9P1Q0 977 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 WTIPA6NIX2 430 aaPredicted RBP13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 ACTN4O43707 911 aaKnown RBP13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 PHACTR2O75167 634 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 CDKL5O76039 1030 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 EVX2Q03828 476 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 MORC3Q14149 939 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 IFNL3Q8IZI9 196 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 LCORLQ8N3X6 602 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 BLZF1Q9H2G9 400 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 MAPK8IP1Q9UQF2 711 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 TCRBV5S4A2TA0A5A2 114 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 STX10O60499 249 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 CASP14P31944 242 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 MPHOSPH8Q99549 860 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
CCDC144CP-201ENST00000340196 NUP188Q5SRE5 1749 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 FAM237AA0A1B0GTK4 181 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 CCP110O43303 1012 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 PTPREP23469 700 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 LMAN1P49257 510 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 IGSF22Q8N9C0 903 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 CERKQ8TCT0 537 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 ARFGAP3Q9NP61 516 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 CALCOCO1Q9P1Z2 691 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 BCL9LQ86UU0 1499 aa13.62□□□□□ -0.23
CCDC144CP-201ENST00000340196 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms