RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 IKBKBO14920 756 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 MAP9Q49MG5 647 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 FBXO38Q6PIJ6 1188 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 NGLY1Q96IV0 654 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 CHMP4BP1P59074 171 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 DMTNQ08495 405 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 DTHD1Q6ZMT9 781 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 LUC7LQ9NQ29 371 aaKnown RBP20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 SLAIN2Q9P270 581 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 LUC7L2Q9Y383 392 aaKnown RBP20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 AKR1B10O60218 316 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 USO1O60763 962 aaKnown RBP20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 CALML3P27482 149 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 CALML4Q96GE6 196 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 TFCP2L1Q9NZI6 479 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 ANKRD26Q9UPS8 1709 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 USP17L12C9JPN9 530 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 USP17L21D6R901 530 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 WDHD1O75717 1129 aaPredicted RBP20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 KRT9P35527 623 aa20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 SMYD4Q8IYR2 804 aaPredicted RBP20.56■□□□□ 0.88
TNFAIP2-201ENST00000333007 CSRNP2Q9H175 543 aa20.55■□□□□ 0.88
TNFAIP2-201ENST00000333007 BAG3O95817 575 aa20.55■□□□□ 0.88
TNFAIP2-201ENST00000333007 RBM28Q9NW13 759 aaKnown RBP20.55■□□□□ 0.88
TNFAIP2-201ENST00000333007 NAPAP54920 295 aa20.55■□□□□ 0.88
TNFAIP2-201ENST00000333007 GPIHBP1Q8IV16 184 aa20.55■□□□□ 0.88
TNFAIP2-201ENST00000333007 VPS18Q9P253 973 aa20.55■□□□□ 0.88
TNFAIP2-201ENST00000333007 FDPSP14324 419 aaKnown RBP20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 CDC27P30260 824 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 ZNF710Q8N1W2 664 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 LCORLQ8N3X6 602 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 PIGBQ92521 554 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 C10orf67Q8IYJ2 551 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 SAMSN1Q9NSI8 373 aaKnown RBP20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 PCDHB6Q9Y5E3 794 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 RFX7Q2KHR2 1363 aa20.54■□□□□ 0.88
TNFAIP2-201ENST00000333007 CYLC1P35663 651 aaPredicted RBP20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 TMEM266Q2M3C6 531 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 EEF2KMTQ96G04 330 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 TMEM232C9JQI7 657 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 AMPD3Q01432 767 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 WWC2Q6AWC2 1192 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 SMARCC1Q92922 1105 aaPredicted RBP20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 STRBPQ96SI9 672 aaKnown RBP20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 PARP10Q53GL7 1025 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 CARD10Q9BWT7 1032 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 MMRN2Q9H8L6 949 aa20.53■□□□□ 0.88
TNFAIP2-201ENST00000333007 PAK1Q13153 545 aa20.52■□□□□ 0.88
TNFAIP2-201ENST00000333007 CCDC122Q5T0U0 273 aa20.52■□□□□ 0.88
TNFAIP2-201ENST00000333007 SPTY2D1Q68D10 685 aaPredicted RBP20.52■□□□□ 0.88
TNFAIP2-201ENST00000333007 CCDC87Q9NVE4 849 aa20.52■□□□□ 0.88
TNFAIP2-201ENST00000333007 MAN1B1Q9UKM7 699 aa20.52■□□□□ 0.88
TNFAIP2-201ENST00000333007 PAFAH1B1P43034 410 aa20.52■□□□□ 0.88
TNFAIP2-201ENST00000333007 DENND2AQ9ULE3 1009 aa20.52■□□□□ 0.88
TNFAIP2-201ENST00000333007 FMNL1O95466 1100 aaPredicted RBP20.52■□□□□ 0.87
TNFAIP2-201ENST00000333007 IFNAR1P17181 557 aa20.52■□□□□ 0.87
TNFAIP2-201ENST00000333007 LETM2Q2VYF4 491 aa20.52■□□□□ 0.87
TNFAIP2-201ENST00000333007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.52■□□□□ 0.87
TNFAIP2-201ENST00000333007 RAB34Q9BZG1 259 aa20.52■□□□□ 0.87
TNFAIP2-201ENST00000333007 RICTORQ6R327 1708 aa20.52■□□□□ 0.87
TNFAIP2-201ENST00000333007 NEDD4P46934 1319 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 PALLDQ8WX93 1383 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 SEC31AO94979 1220 aaKnown RBP20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 MMP1P03956 469 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 CTR9Q6PD62 1173 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 SYMPKQ92797 1274 aaKnown RBP20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 PXDNQ92626 1479 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 CAPN2P17655 700 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 ERCC3P19447 782 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 GNAQP50148 359 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 TXLNBQ8N3L3 684 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 FERMT2Q96AC1 680 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 TSG101Q99816 390 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 UBA5Q9GZZ9 404 aa20.51■□□□□ 0.87
TNFAIP2-201ENST00000333007 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 MYO1BO43795 1136 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 LDHCP07864 332 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 RBM5P52756 815 aaKnown RBP eCLIP20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 ARMCX5Q6P1M9 558 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 VSTM4Q8IW00 320 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 FAM114A1Q8IWE2 563 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 RSPH14Q9UHP6 348 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 CYP2D7A0A087X1C5 515 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 FOXN1O15353 648 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 CHRNDQ07001 517 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 PTGDRQ13258 359 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 ZSCAN10Q96SZ4 725 aaPredicted RBP20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 NAPGQ99747 312 aaPredicted RBP20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 CCDC42Q96M95 316 aa20.5■□□□□ 0.87
TNFAIP2-201ENST00000333007 KRT86O43790 486 aa20.49■□□□□ 0.87
TNFAIP2-201ENST00000333007 OAS2P29728 719 aaKnown RBP20.49■□□□□ 0.87
TNFAIP2-201ENST00000333007 CCZ1BP86790 482 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms