RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 DCP1AQ9NPI6 582 aaPredicted RBP19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 CCL15-CCL14A0A0B4J2E2 113 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 PPATQ06203 517 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 CCL15Q16663 113 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 RNF20Q5VTR2 975 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 FAM43AQ8N2R8 423 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 KCNB2Q92953 911 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 CRNKL1Q9BZJ0 848 aaKnown RBP19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 SAGE1Q9NXZ1 904 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 ZHX2Q9Y6X8 837 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 CCDC171Q6TFL3 1326 aa19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 HTTP42858 3142 aa19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 CENPFP49454 3210 aa19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 CYP2D7A0A087X1C5 515 aa19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 M0R2C6 588 aa19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 CAP2P40123 477 aa19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 FOXP4Q8IVH2 680 aaPredicted RBP19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 MAP4K1Q92918 833 aa19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
PDLIM1-201ENST00000329399 ZKSCAN1P17029 563 aaPredicted RBP19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 GTF2A2P52657 109 aa19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 INHBEP58166 350 aa19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 CERS3Q8IU89 383 aa19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 HERC5Q9UII4 1024 aaKnown RBP19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 KCNH4Q9UQ05 1017 aa19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 AFG3L2Q9Y4W6 797 aa19.52■□□□□ 0.72
PDLIM1-201ENST00000329399 MYH1P12882 1939 aa19.52■□□□□ 0.71
PDLIM1-201ENST00000329399 MYH7P12883 1935 aa19.51■□□□□ 0.71
PDLIM1-201ENST00000329399 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
PDLIM1-201ENST00000329399 GDF11O95390 407 aa19.51■□□□□ 0.71
PDLIM1-201ENST00000329399 ZMYM1Q5SVZ6 1142 aa19.51■□□□□ 0.71
PDLIM1-201ENST00000329399 TM6SF1Q9BZW5 370 aa19.51■□□□□ 0.71
PDLIM1-201ENST00000329399 SNAPC2Q13487 334 aa19.5■□□□□ 0.71
PDLIM1-201ENST00000329399 DGKZQ13574 1117 aa19.5■□□□□ 0.71
PDLIM1-201ENST00000329399 APPBP2Q92624 585 aa19.5■□□□□ 0.71
PDLIM1-201ENST00000329399 DYNLL2Q96FJ2 89 aa19.5■□□□□ 0.71
PDLIM1-201ENST00000329399 FAM227BQ96M60 508 aa19.5■□□□□ 0.71
PDLIM1-201ENST00000329399 PICK1Q9NRD5 415 aa19.5■□□□□ 0.71
PDLIM1-201ENST00000329399 SLC4A4Q9Y6R1 1079 aa19.5■□□□□ 0.71
PDLIM1-201ENST00000329399 A0A0D9SFI3 127 aa19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 GSG1L2A8MUP6 293 aa19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 K7ELQ4 463 aaPredicted RBP19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 CAP1Q01518 475 aa19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 GABPAQ06546 454 aa19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 CRHR2Q13324 411 aa19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 CRACR2BQ8N4Y2 399 aaPredicted RBP19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 SLC44A5Q8NCS7 719 aa19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 U3KPZ7 1027 aaPredicted RBP19.49■□□□□ 0.71
PDLIM1-201ENST00000329399 LAMB1P07942 1786 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 POLR3DP05423 398 aaPredicted RBP19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 CETPP11597 493 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 SHMT1P34896 483 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 NECTIN1Q15223 517 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 GPAT2Q6NUI2 795 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 TATDN1Q6P1N9 297 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 CCDC129Q6ZRS4 1044 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 ZNF296Q8WUU4 475 aaPredicted RBP19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 DSCC1Q9BVC3 393 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 SERPINB13Q9UIV8 391 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 BAZ2AQ9UIF9 1905 aaKnown RBP19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 PHIPQ8WWQ0 1821 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 TRIM75PA6NK02 468 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 USP17L12C9JPN9 530 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 USP17L21D6R901 530 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 GPR25O00155 361 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 GPAA1O43292 621 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 HLA-DOAP06340 250 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 PSMA5P28066 241 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 KRT32Q14532 448 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 CTR9Q6PD62 1173 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 TTC6Q86TZ1 520 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 CFHR5Q9BXR6 569 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 EHD4Q9H223 541 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 IL25Q9H293 177 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 ATP8A2Q9NTI2 1148 aa19.48■□□□□ 0.71
PDLIM1-201ENST00000329399 DDX60LQ5H9U9 1706 aaKnown RBP19.47■□□□□ 0.71
PDLIM1-201ENST00000329399 FOXP2O15409 715 aa19.47■□□□□ 0.71
PDLIM1-201ENST00000329399 SPP2Q13103 211 aa19.47■□□□□ 0.71
PDLIM1-201ENST00000329399 EPB41L4AQ9HCS5 686 aaPredicted RBP19.47■□□□□ 0.71
PDLIM1-201ENST00000329399 A0A0G2JLL6 359 aaPredicted RBP19.46■□□□□ 0.71
PDLIM1-201ENST00000329399 CXCL11O14625 94 aa19.46■□□□□ 0.71
PDLIM1-201ENST00000329399 C12orf60Q5U649 245 aa19.46■□□□□ 0.71
PDLIM1-201ENST00000329399 PRRT2Q7Z6L0 340 aaPredicted RBP19.46■□□□□ 0.71
PDLIM1-201ENST00000329399 DOCK1Q14185 1865 aa19.46■□□□□ 0.71
PDLIM1-201ENST00000329399 ALDH1A1P00352 501 aa19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 GH2P01242 217 aa19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 GUCY1A2P33402 732 aa19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 PTH1RQ03431 593 aa19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 CTNNA3Q9UI47 895 aa19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 ZBTB21Q9ULJ3 1066 aa19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 RBM8AQ9Y5S9 174 aaKnown RBP19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 SNX14Q9Y5W7 946 aa19.45■□□□□ 0.7
PDLIM1-201ENST00000329399 NAV1Q8NEY1 1877 aa19.44■□□□□ 0.7
PDLIM1-201ENST00000329399 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
PDLIM1-201ENST00000329399 NEK4P51957 841 aa19.44■□□□□ 0.7
PDLIM1-201ENST00000329399 TNS4Q8IZW8 715 aa19.44■□□□□ 0.7
PDLIM1-201ENST00000329399 ZNF280CQ8ND82 737 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms