RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 NETO1Q8TDF5 533 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 ADGRE2Q9UHX3 823 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
SKP1-201ENST00000328392 LRIG2O94898 1065 aa6.27□□□□□ -1.41
SKP1-201ENST00000328392 PF4P02776 101 aa6.27□□□□□ -1.41
SKP1-201ENST00000328392 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
SKP1-201ENST00000328392 MCTP1Q6DN14 999 aa6.27□□□□□ -1.41
SKP1-201ENST00000328392 RELL1Q8IUW5 271 aa6.27□□□□□ -1.41
SKP1-201ENST00000328392 FOXQ1Q9C009 403 aa6.27□□□□□ -1.41
SKP1-201ENST00000328392 F13A1P00488 732 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 CEACAM5P06731 702 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 RLBP1P12271 317 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 TAL1P17542 331 aaPredicted RBP6.26□□□□□ -1.41
SKP1-201ENST00000328392 RPL6Q02878 288 aaKnown RBP6.26□□□□□ -1.41
SKP1-201ENST00000328392 NAALADL2Q58DX5 795 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 PRAMEF13Q5VWM6 474 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 ARHGAP27Q6ZUM4 889 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 HID1Q8IV36 788 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 XAGE3Q8WTP9 111 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 FBXL18Q96ME1 805 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 MIPEPQ99797 713 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 DPH2Q9BQC3 489 aaPredicted RBP6.26□□□□□ -1.41
SKP1-201ENST00000328392 USP35Q9P2H5 1018 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 PPP1R1BQ9UD71 204 aaPredicted RBP6.26□□□□□ -1.41
SKP1-201ENST00000328392 TJP2Q9UDY2 1190 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 DDX41Q9UJV9 622 aaKnown RBP6.26□□□□□ -1.41
SKP1-201ENST00000328392 SLC5A6Q9Y289 635 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 CORINQ9Y5Q5 1042 aa6.26□□□□□ -1.41
SKP1-201ENST00000328392 COL17A1Q9UMD9 1497 aaPredicted RBP6.26□□□□□ -1.41
SKP1-201ENST00000328392 FAM221AA4D161 298 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 PRR33A8MZF0 331 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 PGRP06401 933 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 CD8BP10966 210 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 CAP2P40123 477 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 IFI16Q16666 785 aaKnown RBP6.25□□□□□ -1.41
SKP1-201ENST00000328392 AOC3Q16853 763 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 ERMP1Q7Z2K6 904 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 ZNF654Q8IZM8 581 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 RHOVQ96L33 236 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 TMEM74Q96NL1 305 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 MKNK2Q9HBH9 465 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 INPP5FQ9Y2H2 1132 aa6.25□□□□□ -1.41
SKP1-201ENST00000328392 IGF2BP3O00425 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
SKP1-201ENST00000328392 CILPO75339 1184 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 CST3P01034 146 aaPredicted RBP6.24□□□□□ -1.41
SKP1-201ENST00000328392 ZC3H6P61129 1189 aaKnown RBP6.24□□□□□ -1.41
SKP1-201ENST00000328392 LMNB2Q03252 620 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 NKPD1Q17RQ9 610 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 SPACA3Q8IXA5 215 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 RSRP1Q9BUV0 290 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 TGIF2Q9GZN2 237 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 TNKS2Q9H2K2 1166 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 GTF2IRD1Q9UHL9 959 aa6.24□□□□□ -1.41
SKP1-201ENST00000328392 TMEM265A0A087WTH1 108 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 GARTP22102 1010 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 PRKCQQ04759 706 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 SNAP47Q5SQN1 464 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 LETMD1Q6P1Q0 360 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 CBLL1Q75N03 491 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 FBXO27Q8NI29 283 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 ACSF2Q96CM8 615 aaPredicted RBP6.23□□□□□ -1.41
SKP1-201ENST00000328392 MISP3Q96FF7 219 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 SPON2Q9BUD6 331 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 PRDM5Q9NQX1 630 aaPredicted RBP6.23□□□□□ -1.41
SKP1-201ENST00000328392 VAV3Q9UKW4 847 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 TPX2Q9ULW0 747 aaKnown RBP6.23□□□□□ -1.41
SKP1-201ENST00000328392 TACC3Q9Y6A5 838 aa6.23□□□□□ -1.41
SKP1-201ENST00000328392 UPK3BL1B0FP48 263 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 UPK3BL2E5RIL1 263 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 TLR3O15455 904 aaKnown RBP6.22□□□□□ -1.41
SKP1-201ENST00000328392 EIF4A3P38919 411 aaKnown RBP6.22□□□□□ -1.41
SKP1-201ENST00000328392 PAK2Q13177 524 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 PLCL1Q15111 1095 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 CDH24Q86UP0 819 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 CCDC84Q86UT8 332 aaPredicted RBP6.22□□□□□ -1.41
SKP1-201ENST00000328392 MRPL41Q8IXM3 137 aaKnown RBP6.22□□□□□ -1.41
SKP1-201ENST00000328392 STK11IPQ8N1F8 1099 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 MFSD2AQ8NA29 543 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 GOLM1Q8NBJ4 401 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 GATAD2BQ8WXI9 593 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 TMEM87BQ96K49 555 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 HRASLS5Q96KN8 279 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 ADAMTS1Q9UHI8 967 aa6.22□□□□□ -1.41
SKP1-201ENST00000328392 GRIN3BO60391 1043 aa6.21□□□□□ -1.42
SKP1-201ENST00000328392 DNAJA1P31689 397 aaKnown RBP6.21□□□□□ -1.42
SKP1-201ENST00000328392 PWP1Q13610 501 aa6.21□□□□□ -1.42
SKP1-201ENST00000328392 FBXL19Q6PCT2 694 aa6.21□□□□□ -1.42
SKP1-201ENST00000328392 KIAA0825Q8IV33 1275 aa6.21□□□□□ -1.42
SKP1-201ENST00000328392 MCATQ8IVS2 390 aaKnown RBP6.21□□□□□ -1.42
SKP1-201ENST00000328392 AGBL5Q8NDL9 886 aa6.21□□□□□ -1.42
SKP1-201ENST00000328392 ZNF296Q8WUU4 475 aaPredicted RBP6.21□□□□□ -1.42
SKP1-201ENST00000328392 ADAMTS6Q9UKP5 1117 aa6.21□□□□□ -1.42
SKP1-201ENST00000328392 POLR3KQ9Y2Y1 108 aaPredicted RBP6.21□□□□□ -1.42
SKP1-201ENST00000328392 GNAT3A8MTJ3 354 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 IGSF3O75054 1194 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 BPNT1O95861 308 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 CBX7O95931 251 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 PLCG1P19174 1290 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms