RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SAP30BPQ9UHR5 308 aaKnown RBP17.35■□□□□ 0.37
TPM3-205ENST00000328159 UBE2Q2LH0YL09 131 aa17.34■□□□□ 0.37
TPM3-205ENST00000328159 NMT2O60551 498 aa17.34■□□□□ 0.37
TPM3-205ENST00000328159 DEXIO95424 95 aa17.34■□□□□ 0.37
TPM3-205ENST00000328159 NASPP49321 788 aaPredicted RBP17.34■□□□□ 0.37
TPM3-205ENST00000328159 MYSM1Q5VVJ2 828 aa17.34■□□□□ 0.37
TPM3-205ENST00000328159 RBM28Q9NW13 759 aaKnown RBP17.34■□□□□ 0.37
TPM3-205ENST00000328159 RTEL1Q9NZ71 1219 aa17.34■□□□□ 0.37
TPM3-205ENST00000328159 FLT1P17948 1338 aa17.34■□□□□ 0.37
TPM3-205ENST00000328159 GUCY1A2P33402 732 aa17.33■□□□□ 0.37
TPM3-205ENST00000328159 PLCD1P51178 756 aa17.33■□□□□ 0.37
TPM3-205ENST00000328159 TFAP4Q01664 338 aa17.33■□□□□ 0.37
TPM3-205ENST00000328159 TROAPQ12815 778 aa17.33■□□□□ 0.37
TPM3-205ENST00000328159 CMTR1Q8N1G2 835 aaKnown RBP17.33■□□□□ 0.37
TPM3-205ENST00000328159 KLHL34Q8N239 644 aa17.33■□□□□ 0.37
TPM3-205ENST00000328159 BICD2Q8TD16 824 aa17.33■□□□□ 0.37
TPM3-205ENST00000328159 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.37
TPM3-205ENST00000328159 PODNQ7Z5L7 613 aa17.33■□□□□ 0.36
TPM3-205ENST00000328159 DEFB132Q7Z7B7 95 aa17.33■□□□□ 0.36
TPM3-205ENST00000328159 MXD3Q9BW11 206 aa17.33■□□□□ 0.36
TPM3-205ENST00000328159 RNF26Q9BY78 433 aaPredicted RBP17.33■□□□□ 0.36
TPM3-205ENST00000328159 ZNF219Q9P2Y4 722 aaPredicted RBP17.33■□□□□ 0.36
TPM3-205ENST00000328159 TAOK2Q9UL54 1235 aa17.33■□□□□ 0.36
TPM3-205ENST00000328159 TTF2Q9UNY4 1162 aaKnown RBP17.33■□□□□ 0.36
TPM3-205ENST00000328159 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
TPM3-205ENST00000328159 CCDC178Q5BJE1 867 aa17.32■□□□□ 0.36
TPM3-205ENST00000328159 CCDC82Q8N4S0 544 aa17.32■□□□□ 0.36
TPM3-205ENST00000328159 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
TPM3-205ENST00000328159 FUT2Q10981 343 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
TPM3-205ENST00000328159 RCSD1Q6JBY9 416 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 ZNF444Q8N0Y2 327 aaPredicted RBP17.31■□□□□ 0.36
TPM3-205ENST00000328159 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 ANKS1AQ92625 1134 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
TPM3-205ENST00000328159 NUP62CLQ9H1M0 184 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 ZNF287Q9HBT7 754 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
TPM3-205ENST00000328159 POLR3EQ9NVU0 708 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 DACT1Q9NYF0 836 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
TPM3-205ENST00000328159 YEATS4O95619 227 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.365e-7■■■■□ 22.9
TPM3-205ENST00000328159 AKAP17AQ02040 695 aaKnown RBP17.3■□□□□ 0.36
TPM3-205ENST00000328159 C16orf86Q6ZW13 317 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 DGKHQ86XP1 1220 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 LINC00301Q8NCQ3 95 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 SLC44A5Q8NCS7 719 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.3■□□□□ 0.36
TPM3-205ENST00000328159 IL17RBQ9NRM6 502 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 TCP11L1Q9NUJ3 509 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 PRPF3O43395 683 aaKnown RBP17.3■□□□□ 0.36
TPM3-205ENST00000328159 PLEKHA8P1O95397 391 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 MMP1P03956 469 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 TSPY3P0CV98 308 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 TSPY8P0CW00 308 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 RASA1P20936 1047 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 ME1P48163 572 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 STK38Q15208 465 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 CC2D2BQ6DHV5 1058 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 TMTC3Q6ZXV5 915 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
TPM3-205ENST00000328159 KAT14Q9H8E8 782 aa17.3■□□□□ 0.36
TPM3-205ENST00000328159 ZNF646O15015 1829 aaPredicted RBP17.29■□□□□ 0.36
TPM3-205ENST00000328159 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
TPM3-205ENST00000328159 CDK8P49336 464 aa17.29■□□□□ 0.36
TPM3-205ENST00000328159 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
TPM3-205ENST00000328159 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
TPM3-205ENST00000328159 HHIPL2Q6UWX4 724 aa17.29■□□□□ 0.36
TPM3-205ENST00000328159 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
TPM3-205ENST00000328159 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
TPM3-205ENST00000328159 CLSTN2Q9H4D0 955 aa17.29■□□□□ 0.36
TPM3-205ENST00000328159 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
TPM3-205ENST00000328159 ECE2O60344 883 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 NR1I2O75469 434 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 SCNN1DP51172 638 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 FKBP1AP62942 108 aaKnown RBP17.28■□□□□ 0.36
TPM3-205ENST00000328159 KCNQ5Q9NR82 932 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 KCNJ14Q9UNX9 436 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 USP17L3A6NCW0 530 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 USP17L4A6NCW7 530 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 SPTLC2O15270 562 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
TPM3-205ENST00000328159 PKN1Q16512 942 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 MAP3K11Q16584 847 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 STRIP1Q5VSL9 837 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 USP17L1Q7RTZ2 530 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
TPM3-205ENST00000328159 TEKT1Q969V4 418 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 FUCA2Q9BTY2 467 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 USP40Q9NVE5 1235 aa17.28■□□□□ 0.36
TPM3-205ENST00000328159 V9GY48 417 aaPredicted RBP17.28■□□□□ 0.36
TPM3-205ENST00000328159 PICALMQ13492 652 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 CAMK4Q16566 473 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 CCDC73Q6ZRK6 1079 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.35
TPM3-205ENST00000328159 RNF214Q8ND24 703 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms