RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
NLRC3-201ENST00000324659 NGLY1Q96IV0 654 aa13.74□□□□□ -0.21
NLRC3-201ENST00000324659 C8orf37Q96NL8 207 aa13.74□□□□□ -0.21
NLRC3-201ENST00000324659 MRPL44Q9H9J2 332 aaKnown RBP13.74□□□□□ -0.21
NLRC3-201ENST00000324659 SART3Q15020 963 aaKnown RBP13.74□□□□□ -0.21
NLRC3-201ENST00000324659 E2F4Q16254 413 aa13.74□□□□□ -0.21
NLRC3-201ENST00000324659 EFCC1Q9HA90 598 aa13.74□□□□□ -0.21
NLRC3-201ENST00000324659 HOOK1Q9UJC3 728 aaKnown RBP13.74□□□□□ -0.21
NLRC3-201ENST00000324659 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.21
NLRC3-201ENST00000324659 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
NLRC3-201ENST00000324659 RAI14Q9P0K7 980 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 TACC3Q9Y6A5 838 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 DHX8Q14562 1220 aaKnown RBP13.73□□□□□ -0.21
NLRC3-201ENST00000324659 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
NLRC3-201ENST00000324659 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 TTLL11Q8NHH1 800 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 PARD6BQ9BYG5 372 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 RRP15Q9Y3B9 282 aaKnown RBP13.73□□□□□ -0.21
NLRC3-201ENST00000324659 RIPOR2Q9Y4F9 1068 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 CAMTA1Q9Y6Y1 1673 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 RTN1Q16799 776 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 LEKR1Q6ZMV7 388 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 IFNL3Q8IZI9 196 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
NLRC3-201ENST00000324659 KCNQ2O43526 872 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 PRDM1O75626 825 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 CC2D1AQ6P1N0 951 aaPredicted RBP13.72□□□□□ -0.21
NLRC3-201ENST00000324659 MFSD6Q6ZSS7 791 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 STRBPQ96SI9 672 aaKnown RBP13.72□□□□□ -0.21
NLRC3-201ENST00000324659 SRRTQ9BXP5 876 aaKnown RBP13.72□□□□□ -0.21
NLRC3-201ENST00000324659 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 MMP1P03956 469 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
NLRC3-201ENST00000324659 IGHMBP2P38935 993 aaKnown RBP13.72□□□□□ -0.21
NLRC3-201ENST00000324659 CTSWP56202 376 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 MCM6Q14566 821 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 EPSTI1Q96J88 318 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 MED15Q96RN5 788 aa13.72□□□□□ -0.21
NLRC3-201ENST00000324659 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
NLRC3-201ENST00000324659 CCT6AP40227 531 aaKnown RBP13.71□□□□□ -0.21
NLRC3-201ENST00000324659 ARFGAP3Q9NP61 516 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 FBXO2Q9UK22 296 aaPredicted RBP13.71□□□□□ -0.21
NLRC3-201ENST00000324659 RIC1Q4ADV7 1423 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 TJP1Q07157 1748 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 TUBB4AP04350 444 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 MDM2Q00987 491 aaPredicted RBP13.71□□□□□ -0.21
NLRC3-201ENST00000324659 WTAPQ15007 396 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 ICE2Q659A1 982 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.71□□□□□ -0.21
NLRC3-201ENST00000324659 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 MRFAP1Q9Y605 127 aa13.71□□□□□ -0.21
NLRC3-201ENST00000324659 MYO5AQ9Y4I1 1855 aaKnown RBP13.71□□□□□ -0.21
NLRC3-201ENST00000324659 TRPM3Q9HCF6 1732 aaPredicted RBP13.71□□□□□ -0.22
NLRC3-201ENST00000324659 STX10O60499 249 aa13.71□□□□□ -0.22
NLRC3-201ENST00000324659 PHACTR2O75167 634 aa13.71□□□□□ -0.22
NLRC3-201ENST00000324659 TTF1Q15361 905 aaPredicted RBP13.71□□□□□ -0.22
NLRC3-201ENST00000324659 PPFIBP1Q86W92 1011 aa13.71□□□□□ -0.22
NLRC3-201ENST00000324659 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 ERICH2A1L162 156 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 FMNL1O95466 1100 aaPredicted RBP13.7□□□□□ -0.22
NLRC3-201ENST00000324659 BCAMP50895 628 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 RBL2Q08999 1139 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
NLRC3-201ENST00000324659 IGSF22Q8N9C0 903 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
NLRC3-201ENST00000324659 SLC4A4Q9Y6R1 1079 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
NLRC3-201ENST00000324659 PDE8BO95263 885 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 ZNF569Q5MCW4 686 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 SLC4A9Q96Q91 983 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 VPS18Q9P253 973 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 AKR1B15C9JRZ8 316 aaPredicted RBP13.7□□□□□ -0.22
NLRC3-201ENST00000324659 CCDC175P0C221 793 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 RHOXF2BP0C7M4 288 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 PTPREP23469 700 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 FAM193AP78312 1265 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 TBX2Q13207 712 aaPredicted RBP13.7□□□□□ -0.22
NLRC3-201ENST00000324659 UBE3CQ15386 1083 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 RAD9BQ6WBX8 426 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 LCORLQ8N3X6 602 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 RHOXF2Q9BQY4 288 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 ADAM21Q9UKJ8 722 aa13.7□□□□□ -0.22
NLRC3-201ENST00000324659 CSF1RP07333 972 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 CYP19A1P11511 503 aaPredicted RBP13.69□□□□□ -0.22
NLRC3-201ENST00000324659 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
NLRC3-201ENST00000324659 TTC31Q49AM3 519 aaPredicted RBP13.69□□□□□ -0.22
NLRC3-201ENST00000324659 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 MLKLQ8NB16 471 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 GOLGA1Q92805 767 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms