RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GUCA1BQ9UMX6 200 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 COL14A1Q05707 1796 aaKnown RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 GPAA1O43292 621 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 ZAP70P43403 619 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 ESCO1Q5FWF5 840 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 FAM71BQ8TC56 605 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 ENOX1Q8TC92 643 aaKnown RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 NAPGQ99747 312 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 ANGEL1Q9UNK9 670 aaKnown RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 BRWD3Q6RI45 1802 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.65
PTPRA-202ENST00000318266 RANBP6O60518 1105 aaKnown RBP10.96□□□□□ -0.65
PTPRA-202ENST00000318266 SRGAP2O75044 1071 aa10.96□□□□□ -0.65
PTPRA-202ENST00000318266 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
PTPRA-202ENST00000318266 USP5P45974 858 aa10.96□□□□□ -0.65
PTPRA-202ENST00000318266 CPLX2Q6PUV4 134 aaKnown RBP10.96□□□□□ -0.65
PTPRA-202ENST00000318266 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-202ENST00000318266 TBC1D10CQ8IV04 446 aa10.96□□□□□ -0.65
PTPRA-202ENST00000318266 MLKLQ8NB16 471 aa10.96□□□□□ -0.65
PTPRA-202ENST00000318266 ZNF330Q9Y3S2 320 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-202ENST00000318266 KDM3BQ7LBC6 1761 aa10.96□□□□□ -0.65
PTPRA-202ENST00000318266 GOLGA8AA7E2F4 631 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 POTEB2H3BUK9 544 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 LIG3P49916 1009 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 NR5A1Q13285 461 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 TTC19Q6DKK2 380 aaPredicted RBP10.96□□□□□ -0.66
PTPRA-202ENST00000318266 APOA5Q6Q788 366 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 TTC5Q8N0Z6 440 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.66
PTPRA-202ENST00000318266 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 PCDHB6Q9Y5E3 794 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 ZMYM6O95789 1325 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 CTR9Q6PD62 1173 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 AFAP1L1Q8TED9 768 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 PPM1EQ8WY54 764 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 PANX2Q96RD6 677 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 EHD4Q9H223 541 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 ZBTB3Q9H5J0 574 aa10.96□□□□□ -0.66
PTPRA-202ENST00000318266 MRC1P22897 1456 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 A0A1B0GTH6 734 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 PES1O00541 588 aaKnown RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 ZBTB43O43298 467 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 MFAP3LO75121 409 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 CORO7P57737 925 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 FOXO4P98177 505 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 MORC3Q14149 939 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 ARHGEF25Q86VW2 580 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 DIS3L2Q8IYB7 885 aaKnown RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 VPS16Q9H269 839 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 DEF6Q9H4E7 631 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 DACH1Q9UI36 760 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 UBN2Q6ZU65 1347 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 RREB1Q92766 1687 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 RNF225M0QZC1 329 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 GYPCP04921 128 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 DNAJC21Q5F1R6 531 aaKnown RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 FKBP15Q5T1M5 1219 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 SMARCC1Q92922 1105 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 ZKSCAN3Q9BRR0 538 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 CEP126Q9P2H0 1117 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 MKRN1Q9UHC7 482 aaKnown RBP10.95□□□□□ -0.66
PTPRA-202ENST00000318266 SYNRGQ9UMZ2 1314 aa10.95□□□□□ -0.66
PTPRA-202ENST00000318266 CDKL5O76039 1030 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 IL15P40933 162 aaPredicted RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 CCT5P48643 541 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 TOB1P50616 345 aaPredicted RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 PLCD1P51178 756 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 ERVK-24P63145 666 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 MRPS25P82663 173 aaKnown RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 NOSTRINQ8IVI9 506 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 MYO6Q9UM54 1294 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 EYA2O00167 538 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 MYO1BO43795 1136 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 GCP02774 474 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 VPS72Q15906 364 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 TMEM67Q5HYA8 995 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 CCDC148Q8NFR7 591 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 EPSTI1Q96J88 318 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 GBP3Q9H0R5 595 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 CSRNP2Q9H175 543 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 ACBD3Q9H3P7 528 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 NLRP2Q9NX02 1062 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 MAPK8IP1Q9UQF2 711 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 TNS1Q9HBL0 1735 aaKnown RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 THSD7AQ9UPZ6 1657 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 N4BP3O15049 544 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 IDH1O75874 414 aaKnown RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 SYF2O95926 243 aaKnown RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 GUCY2CP25092 1073 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 ZC3H6P61129 1189 aaKnown RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 TTLL7Q6ZT98 887 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 SLC52A2Q9HAB3 445 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms