RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 BICD2Q8TD16 824 aa24.68■■□□□ 1.54
ATG4D-201ENST00000309469 MKNK2Q9HBH9 465 aa24.68■■□□□ 1.54
ATG4D-201ENST00000309469 GUCY1A2P33402 732 aa24.67■■□□□ 1.54
ATG4D-201ENST00000309469 BAG6P46379 1132 aa24.67■■□□□ 1.54
ATG4D-201ENST00000309469 TFAP4Q01664 338 aa24.67■■□□□ 1.54
ATG4D-201ENST00000309469 RBM28Q9NW13 759 aaKnown RBP24.67■■□□□ 1.54
ATG4D-201ENST00000309469 MYH15Q9Y2K3 1946 aa24.67■■□□□ 1.54
ATG4D-201ENST00000309469 FLT1P17948 1338 aa24.66■■□□□ 1.54
ATG4D-201ENST00000309469 QSER1Q2KHR3 1735 aa24.66■■□□□ 1.54
ATG4D-201ENST00000309469 PODNQ7Z5L7 613 aa24.66■■□□□ 1.54
ATG4D-201ENST00000309469 RNF26Q9BY78 433 aaPredicted RBP24.66■■□□□ 1.54
ATG4D-201ENST00000309469 POLR3EQ9NVU0 708 aa24.66■■□□□ 1.54
ATG4D-201ENST00000309469 DACT1Q9NYF0 836 aa24.66■■□□□ 1.54
ATG4D-201ENST00000309469 TAOK2Q9UL54 1235 aa24.66■■□□□ 1.54
ATG4D-201ENST00000309469 F8W031 263 aaPredicted RBP24.65■■□□□ 1.54
ATG4D-201ENST00000309469 MXD3Q9BW11 206 aa24.65■■□□□ 1.54
ATG4D-201ENST00000309469 DDX19AQ9NUU7 478 aaKnown RBP24.65■■□□□ 1.54
ATG4D-201ENST00000309469 TTF2Q9UNY4 1162 aaKnown RBP24.65■■□□□ 1.54
ATG4D-201ENST00000309469 DLEC1Q9Y238 1755 aa24.65■■□□□ 1.54
ATG4D-201ENST00000309469 U2AF2P26368 475 aaKnown RBP eCLIP24.65■■□□□ 1.54
ATG4D-201ENST00000309469 RCSD1Q6JBY9 416 aa24.65■■□□□ 1.54
ATG4D-201ENST00000309469 DEFB132Q7Z7B7 95 aa24.65■■□□□ 1.54
ATG4D-201ENST00000309469 NUP62CLQ9H1M0 184 aa24.65■■□□□ 1.54
ATG4D-201ENST00000309469 ZNF219Q9P2Y4 722 aaPredicted RBP24.65■■□□□ 1.54
ATG4D-201ENST00000309469 CLIC4Q9Y696 253 aa24.65■■□□□ 1.54
ATG4D-201ENST00000309469 FUT2Q10981 343 aa24.64■■□□□ 1.53
ATG4D-201ENST00000309469 GNL2Q13823 731 aaKnown RBP24.64■■□□□ 1.53
ATG4D-201ENST00000309469 DGKHQ86XP1 1220 aa24.64■■□□□ 1.53
ATG4D-201ENST00000309469 ZNF444Q8N0Y2 327 aaPredicted RBP24.64■■□□□ 1.53
ATG4D-201ENST00000309469 LINC00301Q8NCQ3 95 aa24.64■■□□□ 1.53
ATG4D-201ENST00000309469 C7orf43Q8WVR3 580 aa24.64■■□□□ 1.53
ATG4D-201ENST00000309469 ZNF287Q9HBT7 754 aa24.64■■□□□ 1.53
ATG4D-201ENST00000309469 IL17RBQ9NRM6 502 aa24.64■■□□□ 1.53
ATG4D-201ENST00000309469 NAV1Q8NEY1 1877 aa24.64■■□□□ 1.53
ATG4D-201ENST00000309469 YEATS4O95619 227 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 CCDC178Q5BJE1 867 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 ANKS1AQ92625 1134 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.63■■□□□ 1.53
ATG4D-201ENST00000309469 PDGFDQ9GZP0 370 aaPredicted RBP24.63■■□□□ 1.53
ATG4D-201ENST00000309469 DBNDD1Q9H9R9 158 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 NR1I2O75469 434 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 ME1P48163 572 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 AKAP17AQ02040 695 aaKnown RBP24.63■■□□□ 1.53
ATG4D-201ENST00000309469 STK38Q15208 465 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 SLC44A5Q8NCS7 719 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 TCP11L1Q9NUJ3 509 aa24.63■■□□□ 1.53
ATG4D-201ENST00000309469 PRPF3O43395 683 aaKnown RBP24.62■■□□□ 1.53
ATG4D-201ENST00000309469 PLEKHA8P1O95397 391 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 MMP1P03956 469 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 TSPY3P0CV98 308 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 TSPY8P0CW00 308 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 ANO1Q5XXA6 986 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 C16orf86Q6ZW13 317 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 CCAR1Q8IX12 1150 aaKnown RBP24.62■■□□□ 1.53
ATG4D-201ENST00000309469 CTCFLQ8NI51 663 aaPredicted RBP24.62■■□□□ 1.53
ATG4D-201ENST00000309469 KCNG4Q8TDN1 519 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 ECM29Q5VYK3 1845 aa24.62■■□□□ 1.53
ATG4D-201ENST00000309469 RASA1P20936 1047 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 SAFBQ15424 915 aaKnown RBP eCLIP24.61■■□□□ 1.53
ATG4D-201ENST00000309469 TMTC3Q6ZXV5 915 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 ANP32BQ92688 251 aaKnown RBP24.61■■□□□ 1.53
ATG4D-201ENST00000309469 FUCA2Q9BTY2 467 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 KAT14Q9H8E8 782 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 SLX4Q8IY92 1834 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 CDK8P49336 464 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 SF3A1Q15459 793 aaKnown RBP24.61■■□□□ 1.53
ATG4D-201ENST00000309469 RNF214Q8ND24 703 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 CLSTN2Q9H4D0 955 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 KCNQ5Q9NR82 932 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 PCDHA7Q9UN72 937 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 KCNJ14Q9UNX9 436 aa24.61■■□□□ 1.53
ATG4D-201ENST00000309469 CAMK4Q16566 473 aa24.6■■□□□ 1.53
ATG4D-201ENST00000309469 CC2D2BQ6DHV5 1058 aa24.6■■□□□ 1.53
ATG4D-201ENST00000309469 HHIPL2Q6UWX4 724 aa24.6■■□□□ 1.53
ATG4D-201ENST00000309469 TNMDQ9H2S6 317 aa24.6■■□□□ 1.53
ATG4D-201ENST00000309469 USP17L3A6NCW0 530 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 USP17L4A6NCW7 530 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 SPTLC2O15270 562 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 SCNN1DP51172 638 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 PKN1Q16512 942 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 MAP3K11Q16584 847 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 ADALQ6DHV7 355 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 USP17L1Q7RTZ2 530 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 V9GY48 417 aaPredicted RBP24.59■■□□□ 1.53
ATG4D-201ENST00000309469 STRIP1Q5VSL9 837 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 DIS3L2Q8IYB7 885 aaKnown RBP24.59■■□□□ 1.53
ATG4D-201ENST00000309469 TEKT1Q969V4 418 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 USP40Q9NVE5 1235 aa24.59■■□□□ 1.53
ATG4D-201ENST00000309469 DDX60LQ5H9U9 1706 aaKnown RBP24.59■■□□□ 1.53
ATG4D-201ENST00000309469 CDK5RAP2Q96SN8 1893 aa24.58■■□□□ 1.53
ATG4D-201ENST00000309469 BTBD18B2RXH4 712 aa24.58■■□□□ 1.53
ATG4D-201ENST00000309469 ECE2O60344 883 aa24.58■■□□□ 1.53
ATG4D-201ENST00000309469 FKBP1AP62942 108 aaKnown RBP24.58■■□□□ 1.53
ATG4D-201ENST00000309469 NOSTRINQ8IVI9 506 aa24.58■■□□□ 1.53
ATG4D-201ENST00000309469 SRBD1Q8N5C6 995 aaKnown RBP24.58■■□□□ 1.53
ATG4D-201ENST00000309469 FOXP1Q9H334 677 aaPredicted RBP24.58■■□□□ 1.53
ATG4D-201ENST00000309469 GOLPH3LQ9H4A5 285 aa24.58■■□□□ 1.53
ATG4D-201ENST00000309469 A0A1W2PQ27 194 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 A0A1W2PQ64 194 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 A0A1W2PQD8 194 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms