RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZNF496Q96IT1 587 aaPredicted RBP14.71□□□□□ -0.06
TRIM35-201ENST00000305364 TRIM47Q96LD4 638 aa14.71□□□□□ -0.06
TRIM35-201ENST00000305364 PANX2Q96RD6 677 aa14.71□□□□□ -0.06
TRIM35-201ENST00000305364 SETD1BQ9UPS6 1966 aaKnown RBP14.7□□□□□ -0.06
TRIM35-201ENST00000305364 ZAP70P43403 619 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 RESP18Q5W5W9 173 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 TNRQ92752 1358 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 KIF5AQ12840 1032 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 ZMYM6O95789 1325 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 FMR1Q06787 632 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRIM35-201ENST00000305364 LDHAL6AQ6ZMR3 332 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 ANKRD18AQ8IVF6 992 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 PSMB7Q99436 277 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 CAPN7Q9Y6W3 813 aa14.7□□□□□ -0.06
TRIM35-201ENST00000305364 XAGE2Q96GT9 111 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 SAMM50Q9Y512 469 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 USP31Q70CQ4 1352 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 ATP2C2O75185 946 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 PRR29P0C7W0 189 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 TRIML1Q8N9V2 468 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 CCDC51Q96ER9 411 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRIM35-201ENST00000305364 CAPS2Q9BXY5 557 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 BLZF1Q9H2G9 400 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 A2ML1A8K2U0 1454 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 MTIF2P46199 727 aaKnown RBP14.69□□□□□ -0.06
TRIM35-201ENST00000305364 MEX3CQ5U5Q3 659 aaKnown RBP14.69□□□□□ -0.06
TRIM35-201ENST00000305364 RAD9BQ6WBX8 426 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 MMS22LQ6ZRQ5 1243 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 CEP57Q86XR8 500 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
TRIM35-201ENST00000305364 EPN1Q9Y6I3 576 aaPredicted RBP14.69□□□□□ -0.06
TRIM35-201ENST00000305364 APOA5Q6Q788 366 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 MAATS1Q7Z4T9 603 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 ARHGEF25Q86VW2 580 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 ZNF174Q15697 407 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 RIN2Q8WYP3 895 aaPredicted RBP14.68□□□□□ -0.06
TRIM35-201ENST00000305364 JAKMIP2Q96AA8 810 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 BCCIPQ9P287 314 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRIM35-201ENST00000305364 MFAP3LO75121 409 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 ERCC5P28715 1186 aaPredicted RBP14.68□□□□□ -0.06
TRIM35-201ENST00000305364 TMEM87BQ96K49 555 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 CEP170BQ9Y4F5 1589 aaPredicted RBP14.68□□□□□ -0.06
TRIM35-201ENST00000305364 AKR1B10O60218 316 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 TFRCP02786 760 aaKnown RBP14.68□□□□□ -0.06
TRIM35-201ENST00000305364 LTKP29376 864 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 CASP1P29466 404 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 L1RE1Q9UN81 338 aa14.68□□□□□ -0.06
TRIM35-201ENST00000305364 GSPT2Q8IYD1 628 aaKnown RBP14.67□□□□□ -0.06
TRIM35-201ENST00000305364 TANGO6Q9C0B7 1094 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 ATP1A2P50993 1020 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRIM35-201ENST00000305364 MCTP2Q6DN12 878 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 NOA1Q8NC60 698 aaKnown RBP14.67□□□□□ -0.06
TRIM35-201ENST00000305364 GOLGA6L7A0A1B0GV03 622 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 TACC1O75410 805 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 GPIHBP1Q8IV16 184 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 IFT81Q8WYA0 676 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 CCDC42Q96M95 316 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 CSRNP2Q9H175 543 aa14.67□□□□□ -0.06
TRIM35-201ENST00000305364 SRGAP2O75044 1071 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 NF2P35240 595 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 HNRNPLLQ8WVV9 542 aaKnown RBP14.66□□□□□ -0.06
TRIM35-201ENST00000305364 ALS2CR12Q96Q35 445 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 PUS3Q9BZE2 481 aaKnown RBP14.66□□□□□ -0.06
TRIM35-201ENST00000305364 PUS7LQ9H0K6 701 aaKnown RBP14.66□□□□□ -0.06
TRIM35-201ENST00000305364 ANKZF1Q9H8Y5 726 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 hCG_1642624A0A1W2PR95 340 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 SSBP05455 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRIM35-201ENST00000305364 ATP6V1AP38606 617 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 PPFIA1Q13136 1202 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 NR5A1Q13285 461 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 TRIM14Q14142 442 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 PACS2Q86VP3 889 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 IFNL2Q8IZJ0 200 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 CDC27P30260 824 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 PAK1Q13153 545 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 TTF1Q15361 905 aaPredicted RBP14.66□□□□□ -0.06
TRIM35-201ENST00000305364 PI16Q6UXB8 463 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 LRRC31Q6UY01 552 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 OR8K1Q8NGG5 319 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 HAUS4Q9H6D7 363 aa14.66□□□□□ -0.06
TRIM35-201ENST00000305364 RANBP6O60518 1105 aaKnown RBP14.65□□□□□ -0.06
TRIM35-201ENST00000305364 GCP02774 474 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 GGCXP38435 758 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 CORO7P57737 925 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 NLRP5P59047 1200 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 MAP3K12Q12852 859 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 LRP2BPQ9P2M1 347 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 FAM169AQ9Y6X4 670 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 GUCY2CP25092 1073 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 ADORA1P30542 326 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 CTDSPL2Q05D32 466 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 ENOX2Q16206 610 aaKnown RBP14.65□□□□□ -0.06
TRIM35-201ENST00000305364 TDRD12Q587J7 1177 aaKnown RBP14.65□□□□□ -0.06
TRIM35-201ENST00000305364 CFAP58Q5T655 872 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 PLBD2Q8NHP8 589 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 NCAPGQ9BPX3 1015 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms