RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 RNF41Q9H4P4 317 aaPredicted RBP8.73□□□□□ -1.01
TRIM42-201ENST00000286349 LRP2BPQ9P2M1 347 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 ANGEL1Q9UNK9 670 aaKnown RBP8.73□□□□□ -1.01
TRIM42-201ENST00000286349 PAXBP1Q9Y5B6 917 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 CPLX1O14810 134 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 BCAMP50895 628 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 TMC4Q7Z404 712 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 VPS37DQ86XT2 251 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 IFNL3Q8IZI9 196 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
TRIM42-201ENST00000286349 TBC1D16Q8TBP0 767 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 DLEC1Q9Y238 1755 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 KLF18A0A0U1RQI7 1052 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 GOLGA8BA8MQT2 603 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 NFKBIEO00221 500 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 CTDNEP1O95476 244 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 CCT2P78371 535 aaKnown RBP8.72□□□□□ -1.01
TRIM42-201ENST00000286349 CBX1P83916 185 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 FOXD4Q12950 439 aaPredicted RBP8.72□□□□□ -1.01
TRIM42-201ENST00000286349 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 LEO1Q8WVC0 666 aaPredicted RBP8.72□□□□□ -1.01
TRIM42-201ENST00000286349 DDX11Q96FC9 970 aa8.72□□□□□ -1.01
TRIM42-201ENST00000286349 RTFDC1Q9BY42 306 aaPredicted RBP8.72□□□□□ -1.01
TRIM42-201ENST00000286349 NUCKS1Q9H1E3 243 aaKnown RBP8.72□□□□□ -1.01
TRIM42-201ENST00000286349 DDX19AQ9NUU7 478 aaKnown RBP8.72□□□□□ -1.01
TRIM42-201ENST00000286349 TIAM2Q8IVF5 1701 aa8.71□□□□□ -1.01
TRIM42-201ENST00000286349 MBD4O95243 580 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 PAX7P23759 505 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 LIFRP42702 1097 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 SART3Q15020 963 aaKnown RBP8.71□□□□□ -1.02
TRIM42-201ENST00000286349 TTC6Q86TZ1 520 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 STAG1Q8WVM7 1258 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 ANKIB1Q9P2G1 1089 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 XDHP47989 1333 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 TCHHQ07283 1943 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 SH2B2O14492 632 aaPredicted RBP8.71□□□□□ -1.02
TRIM42-201ENST00000286349 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
TRIM42-201ENST00000286349 PCP11498 1178 aaKnown RBP8.71□□□□□ -1.02
TRIM42-201ENST00000286349 RCAN1P53805 252 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 ANTXR2P58335 489 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 GET4Q7L5D6 327 aaPredicted RBP8.71□□□□□ -1.02
TRIM42-201ENST00000286349 CHST3Q7LGC8 479 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 SGMS1Q86VZ5 419 aa8.71□□□□□ -1.02
TRIM42-201ENST00000286349 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
TRIM42-201ENST00000286349 DUOX1Q9NRD9 1551 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 A0A1B0GUL6 1792 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 TPM3P06753 285 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 CCDC192P0DO97 292 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 NT5C2P49902 561 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 BIRC2Q13490 618 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 AKNAD1Q5T1N1 836 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 TMCO4Q5TGY1 634 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 GIMAP6Q6P9H5 292 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 DPP8Q6V1X1 898 aaPredicted RBP8.7□□□□□ -1.02
TRIM42-201ENST00000286349 SYNE3Q6ZMZ3 975 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 MFSD6Q6ZSS7 791 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 BRAPQ7Z569 592 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 TBC1D10CQ8IV04 446 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 PDLIM2Q96JY6 352 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 FAM84BQ96KN1 310 aaPredicted RBP8.7□□□□□ -1.02
TRIM42-201ENST00000286349 LEMD3Q9Y2U8 911 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 SLC4A4Q9Y6R1 1079 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 LTBP1Q14766 1721 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 ERICH2A1L162 156 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 GSG1L2A8MUP6 293 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 UFL1O94874 794 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 ATP2B4P23634 1241 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 METAP2P50579 478 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRIM42-201ENST00000286349 CCDC93Q567U6 631 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 CCDC181Q5TID7 509 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 FBXO33Q7Z6M2 555 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 CREBRFQ8IUR6 639 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 PIK3R5Q8WYR1 880 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 C8orf76Q96K31 380 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 ARMT1Q9H993 441 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 GGA1Q9UJY5 639 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 SUFUQ9UMX1 484 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 FRMD4BQ9Y2L6 1034 aa8.7□□□□□ -1.02
TRIM42-201ENST00000286349 NID2Q14112 1375 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 LRRC37AA6NMS7 1700 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 MAGEB6P1A0A0J9YX57 407 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 CYP7A1P22680 504 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 GYG1P46976 350 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 RASSF7Q02833 373 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 PPP2R5BQ15173 497 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 CDC37Q16543 378 aaPredicted RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 MAP3K11Q16584 847 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 C15orf52Q6ZUT6 534 aaKnown RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 RTKN2Q8IZC4 609 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 WASF1Q92558 559 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 ERCC4Q92889 916 aaPredicted RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 NCOA5Q9HCD5 579 aaKnown RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 ZNF277Q9NRM2 450 aaPredicted RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 RCOR1Q9UKL0 485 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 HPS5Q9UPZ3 1129 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 CCDC69A6NI79 296 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 C6orf229H3BNL8 230 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms