RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 EGFL6Q8IUX8 553 aa8.66□□□□□ -1.02
TRIM6-201ENST00000278302 MPHOSPH8Q99549 860 aa8.66□□□□□ -1.02
TRIM6-201ENST00000278302 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
TRIM6-201ENST00000278302 EIF3JO75822 258 aaKnown RBP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 PDE6AP16499 860 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 NDUFA8P51970 172 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 CASP8Q14790 479 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 BRD3Q15059 726 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 SAMD1Q6SPF0 538 aaPredicted RBP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 PDILTQ8N807 584 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 ALG1Q9BT22 464 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 DENND2AQ9ULE3 1009 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 XIRP1Q702N8 1843 aaKnown RBP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 RIC1Q4ADV7 1423 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 A0A1W2PQ27 194 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 A0A1W2PQ64 194 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 A0A1W2PQD8 194 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 CDKL5O76039 1030 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 YEATS4O95619 227 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 SERPINC1P01008 464 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 SLC5A1P13866 664 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 CCT5P48643 541 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 PUM3Q15397 648 aaKnown RBP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 CYB5R4Q7L1T6 521 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 RPAINQ86UA6 219 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 TBC1D10CQ8IV04 446 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 FMR1NBQ8N0W7 255 aaPredicted RBP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 RIN2Q8WYP3 895 aaPredicted RBP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 LPIN2Q92539 896 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 ZNF512BQ96KM6 892 aaPredicted RBP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 SLC4A9Q96Q91 983 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 BCCIPQ9P287 314 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRIM6-201ENST00000278302 L1RE1Q9UN81 338 aa8.65□□□□□ -1.02
TRIM6-201ENST00000278302 WDR19Q8NEZ3 1342 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 A0A0U1RQJ8 604 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 LRRIQ3A6PVS8 624 aaPredicted RBP8.65□□□□□ -1.03
TRIM6-201ENST00000278302 ZSCAN12O43309 604 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 KIF1CO43896 1103 aaKnown RBP8.65□□□□□ -1.03
TRIM6-201ENST00000278302 UBASH3AP57075 661 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 VSNL1P62760 191 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 TRIM29Q14134 588 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 ANO1Q5XXA6 986 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 MICU3Q86XE3 530 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 ATRIPQ8WXE1 791 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 KIFC2Q96AC6 838 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 GDAP1L1Q96MZ0 367 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 POLR3EQ9NVU0 708 aa8.65□□□□□ -1.03
TRIM6-201ENST00000278302 SHANK3Q9BYB0 1731 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 MROH5Q6ZUA9 1318 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 ERVV-1B6SEH8 477 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 MAP3K12Q12852 859 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 NCAPHQ15003 741 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 TMEM67Q5HYA8 995 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 MAGEB6Q8N7X4 407 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 VGLL2Q8N8G2 317 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 AIFM3Q96NN9 605 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 NAPBQ9H115 298 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 EHD4Q9H223 541 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 LZTFL1Q9NQ48 299 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 TOGARAM1Q9Y4F4 1720 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 ZMYM6O95789 1325 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 KIF28PB7ZC32 967 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 ZBTB43O43298 467 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 RNF40O75150 1001 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 SLC3A2P08195 630 aaKnown RBP8.64□□□□□ -1.03
TRIM6-201ENST00000278302 MARCKSP29966 332 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-201ENST00000278302 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-201ENST00000278302 IARSP41252 1262 aaKnown RBP8.64□□□□□ -1.03
TRIM6-201ENST00000278302 ADKP55263 362 aaKnown RBP8.64□□□□□ -1.03
TRIM6-201ENST00000278302 KIF23Q02241 960 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-201ENST00000278302 TMED8Q6PL24 325 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-201ENST00000278302 SPATA5Q8NB90 893 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 PHKBQ93100 1093 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 NBPF3Q9H094 633 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 INCENPQ9NQS7 918 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 NWD2Q9ULI1 1742 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 MYH15Q9Y2K3 1946 aa8.64□□□□□ -1.03
TRIM6-201ENST00000278302 GOLGA8AA7E2F4 631 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SH2B2O14492 632 aaPredicted RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 IFIT3O14879 490 aaKnown RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 ZNF202O95125 648 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 MTF1Q14872 753 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 RRP12Q5JTH9 1297 aaKnown RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 STK11IPQ8N1F8 1099 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 TMEM87BQ96K49 555 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 STRBPQ96SI9 672 aaKnown RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 KIAA1468Q9P260 1216 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 CCDC196A0A1B0GTZ2 297 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SNAP23O00161 211 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 CUTAO60888 179 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 MBD4O95243 580 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 TOP1P11387 765 aaKnown RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 KRT40Q6A162 431 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms