RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 POSTNQ15063 836 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 RPS6KA1Q15418 735 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 PPANQ9NQ55 473 aaKnown RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 ASIC3Q9UHC3 531 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 WWC3Q9ULE0 1092 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 ABCC2Q92887 1545 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 CCNT1O60563 726 aaKnown RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 KIF11P52732 1056 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 TFCP2Q12800 502 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 COPS6Q7L5N1 327 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 HAUS7Q99871 368 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 RNF40O75150 1001 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 TTC38Q5R3I4 469 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 PEX26Q7Z412 305 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 CLASP1Q7Z460 1538 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 RNF168Q8IYW5 571 aaPredicted RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 GOLGA5Q8TBA6 731 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 TTC36A6NLP5 189 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 TCEANC2Q96MN5 208 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 ABCC10Q5T3U5 1492 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 APBA1Q02410 837 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 LMBR1LQ6UX01 489 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 EDC4Q6P2E9 1401 aaKnown RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 GOLGA8QA0A0J9YX86 632 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 GOLGA8OA6NCC3 632 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 GOLGA8NF8WBI6 632 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 RIOK3O14730 519 aaKnown RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 BACH1O14867 736 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 EVI5O60447 810 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 GBP7Q8N8V2 638 aaPredicted RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 OAS2P29728 719 aaKnown RBP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 VSIG1Q86XK7 387 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 TROVE2P10155 538 aaKnown RBP eCLIP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 DPH6Q7L8W6 267 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 NELFBQ8WX92 580 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 ZNF622Q969S3 477 aaKnown RBP eCLIP8.84□□□□□ -0.99
LIMD1-201ENST00000273317 NGLY1Q96IV0 654 aa8.84□□□□□ -0.99
LIMD1-201ENST00000273317 SLC27A2O14975 620 aa8.84□□□□□ -1
LIMD1-201ENST00000273317 SLC4A8Q2Y0W8 1093 aa8.84□□□□□ -1
LIMD1-201ENST00000273317 RBM17Q96I25 401 aaKnown RBP8.84□□□□□ -1
LIMD1-201ENST00000273317 ADCY7P51828 1080 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 PDE4DQ08499 809 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 TRIM58Q8NG06 486 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 RASA3Q14644 834 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 RGS16O15492 202 aaPredicted RBP8.83□□□□□ -1
LIMD1-201ENST00000273317 ZNF202O95125 648 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 A0A1B0GVL5 298 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 LARSQ9P2J5 1176 aaKnown RBP8.83□□□□□ -1
LIMD1-201ENST00000273317 ARHGEF10O15013 1369 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 ERCC3P19447 782 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 RBSNQ9H1K0 784 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 BICC1Q9H694 974 aaKnown RBP8.83□□□□□ -1
LIMD1-201ENST00000273317 MAGEF1Q9HAY2 307 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 CBX8Q9HC52 389 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 PICALMQ13492 652 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 FAM212AQ96EL1 285 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 DCAF5Q96JK2 942 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 ARHGEF35A5YM69 484 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 H0YCG3 227 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 ZNF174Q15697 407 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 IWS1Q96ST2 819 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 FOXO3O43524 673 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 MAP2K2P36507 400 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 PPFIA2O75334 1257 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 SATB1Q01826 763 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 LRRC43Q8N309 656 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 NSMCE1Q8WV22 266 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 CTTNBP2NLQ9P2B4 639 aa8.83□□□□□ -1
LIMD1-201ENST00000273317 CCDC170Q8IYT3 715 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 MIS12Q9H081 205 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 HOMER3Q9NSC5 361 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 MAN1A1P33908 653 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 IDI1Q13907 227 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 CALCRLQ16602 461 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 HAUS1Q96CS2 278 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 NT5C3AQ9H0P0 336 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 CA8P35219 290 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 TRMT1LQ7Z2T5 733 aaKnown RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 CCDC105Q8IYK2 499 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 BBOF1Q8ND07 529 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 FAM71BQ8TC56 605 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 FAM135BQ49AJ0 1406 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 POLR2DO15514 142 aaKnown RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 CUL4BQ13620 913 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 LCA5Q86VQ0 697 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 IL2RBP14784 551 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 MUM1Q2TAK8 710 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 C8orf58Q8NAV2 365 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 KLHL14Q9P2G3 628 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 NIP7Q9Y221 180 aaKnown RBP eCLIP8.82□□□□□ -1
LIMD1-201ENST00000273317 BRDTQ58F21 947 aaPredicted RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 CABS1Q96KC9 395 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 TYW1Q9NV66 732 aaKnown RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 MBD4O95243 580 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 EIF4A2Q14240 407 aaKnown RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 DIXDC1Q155Q3 683 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 KRT71Q3SY84 523 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms