RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
CHFR-201ENST00000266880 TCP11Q8WWU5 503 aa12.34□□□□□ -0.43
CHFR-201ENST00000266880 CYP7A1P22680 504 aa12.33□□□□□ -0.43
CHFR-201ENST00000266880 GNL1P36915 607 aaPredicted RBP12.33□□□□□ -0.43
CHFR-201ENST00000266880 BRAPQ7Z569 592 aa12.33□□□□□ -0.43
CHFR-201ENST00000266880 IFIH1Q9BYX4 1025 aaKnown RBP12.33□□□□□ -0.43
CHFR-201ENST00000266880 RRP36Q96EU6 259 aaKnown RBP12.33□□□□□ -0.44
CHFR-201ENST00000266880 DESI2Q9BSY9 194 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 RPL13P26373 211 aaKnown RBP12.33□□□□□ -0.44
CHFR-201ENST00000266880 GRAMD4Q6IC98 578 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 UBE3BQ7Z3V4 1068 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 CCDC197Q8NCU1 140 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHFR-201ENST00000266880 RXRAP19793 462 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 CALML3P27482 149 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 HAUS1Q96CS2 278 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 NCBP1Q09161 790 aaKnown RBP12.33□□□□□ -0.44
CHFR-201ENST00000266880 RAD50Q92878 1312 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 SETD1BQ9UPS6 1966 aaKnown RBP12.33□□□□□ -0.44
CHFR-201ENST00000266880 SFMBT2Q5VUG0 894 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 DTHD1Q6ZMT9 781 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 TRIML1Q8N9V2 468 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 TBC1D7Q9P0N9 293 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 PTPDC1A2A3K4 754 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 AK2P54819 239 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 RAB17Q9H0T7 212 aa12.33□□□□□ -0.44
CHFR-201ENST00000266880 ADAT2Q7Z6V5 191 aaKnown RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 SYCE1Q8N0S2 351 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 UHMK1Q8TAS1 419 aaKnown RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 CWF19L2Q2TBE0 894 aaKnown RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 HP1BP3Q5SSJ5 553 aaPredicted RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 HNRNPCL2B2RXH8 293 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 HNRNPCL1O60812 293 aaKnown RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 SERPINI2O75830 405 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 MYO1AQ9UBC5 1043 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 TMTC4Q5T4D3 741 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 TYW1BQ6NUM6 668 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 DCUN1D2Q6PH85 259 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 SAT1P21673 171 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 GJC2Q5T442 439 aaPredicted RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 WDR75Q8IWA0 830 aaKnown RBP12.32□□□□□ -0.44
CHFR-201ENST00000266880 ARHGEF9O43307 516 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 FBXO41Q8TF61 875 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 THAP12O43422 761 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 IFT122Q9HBG6 1241 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 KRT82Q9NSB4 513 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 MCMDC2Q4G0Z9 681 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 BCAS4Q8TDM0 211 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
CHFR-201ENST00000266880 GFAPP14136 432 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 CCDC138Q96M89 665 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 G3BP2Q9UN86 482 aaKnown RBP12.31□□□□□ -0.44
CHFR-201ENST00000266880 SUN1O94901 812 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 SMC5Q8IY18 1101 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 AMOTL2Q9Y2J4 779 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 KRIT1O00522 736 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 GSTO1P78417 241 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 PROSER2Q86WR7 435 aaPredicted RBP12.31□□□□□ -0.44
CHFR-201ENST00000266880 PALM2Q8IXS6 379 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 PPWD1Q96BP3 646 aaKnown RBP12.31□□□□□ -0.44
CHFR-201ENST00000266880 DYDC2Q96IM9 177 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 RMI1Q9H9A7 625 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 NPHP3Q7Z494 1330 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 CNNM4Q6P4Q7 775 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 SV2BQ7L1I2 683 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 NELFBQ8WX92 580 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 RSAD2Q8WXG1 361 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 CALUO43852 315 aaPredicted RBP12.31□□□□□ -0.44
CHFR-201ENST00000266880 IRX1P78414 480 aaPredicted RBP12.31□□□□□ -0.44
CHFR-201ENST00000266880 GABPB2Q8TAK5 448 aaPredicted RBP12.31□□□□□ -0.44
CHFR-201ENST00000266880 TTC4O95801 387 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 GNAQP50148 359 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 PRPF38AQ8NAV1 312 aaKnown RBP12.31□□□□□ -0.44
CHFR-201ENST00000266880 GSTA4O15217 222 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 CSGALNACT2Q8N6G5 542 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 HDAC11Q96DB2 347 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 SMARCA4P51532 1647 aa12.31□□□□□ -0.44
CHFR-201ENST00000266880 CEP19Q96LK0 163 aa12.3□□□□□ -0.44
CHFR-201ENST00000266880 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
CHFR-201ENST00000266880 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
CHFR-201ENST00000266880 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
CHFR-201ENST00000266880 PHBP35232 272 aa12.3□□□□□ -0.44
CHFR-201ENST00000266880 TMTC1Q8IUR5 882 aa12.3□□□□□ -0.44
CHFR-201ENST00000266880 MED4Q9NPJ6 270 aa12.3□□□□□ -0.44
CHFR-201ENST00000266880 PTPRGP23470 1445 aa12.3□□□□□ -0.44
CHFR-201ENST00000266880 F8W031 263 aaPredicted RBP12.3□□□□□ -0.44
CHFR-201ENST00000266880 SEC31AO94979 1220 aaKnown RBP12.3□□□□□ -0.44
CHFR-201ENST00000266880 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
CHFR-201ENST00000266880 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms