RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 DENND2CQ68D51 928 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 DDX41Q9UJV9 622 aaKnown RBP16.73■□□□□ 0.27
NID1-201ENST00000264187 SPECC1L-ADORA2AF8WAN1 911 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 SAT1P21673 171 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 PAK2Q13177 524 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 DCLK2Q8N568 766 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 HINFPQ9BQA5 517 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 CBX8Q9HC52 389 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 SRGAP1Q7Z6B7 1085 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 IL16Q14005 1332 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 COG7P83436 770 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 LONRF2Q1L5Z9 754 aa16.73■□□□□ 0.27
NID1-201ENST00000264187 ARHGAP25P42331 645 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 HS1BP3Q53T59 392 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 EXOC7Q9UPT5 735 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 DEXIO95424 95 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 ABCB4P21439 1286 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 IL1RL1Q01638 556 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 PHKBQ93100 1093 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
NID1-201ENST00000264187 PPP1R12AO14974 1030 aaPredicted RBP16.72■□□□□ 0.27
NID1-201ENST00000264187 IDI1Q13907 227 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 DIS3L2Q8IYB7 885 aaKnown RBP16.72■□□□□ 0.27
NID1-201ENST00000264187 NAP1L4Q99733 375 aaKnown RBP16.72■□□□□ 0.27
NID1-201ENST00000264187 MRPL44Q9H9J2 332 aaKnown RBP16.72■□□□□ 0.27
NID1-201ENST00000264187 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
NID1-201ENST00000264187 NFE2L3Q9Y4A8 694 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 SORBS3O60504 671 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 FAM71BQ8TC56 605 aa16.72■□□□□ 0.27
NID1-201ENST00000264187 RTCBQ9Y3I0 505 aaKnown RBP16.72■□□□□ 0.27
NID1-201ENST00000264187 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 ZNF75DP51815 510 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 RRAGAQ7L523 313 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 ADAT2Q7Z6V5 191 aaKnown RBP16.71■□□□□ 0.27
NID1-201ENST00000264187 PLEKHM2Q8IWE5 1019 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 PALM2Q8IXS6 379 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 MORC4Q8TE76 937 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 LRWD1Q9UFC0 647 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 TPX2Q9ULW0 747 aaKnown RBP16.71■□□□□ 0.27
NID1-201ENST00000264187 ABL1P00519 1130 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 CFAP221Q4G0U5 840 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 NELFBQ8WX92 580 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 ATP1A2P50993 1020 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 PPP2R5AQ15172 486 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 SCYL2Q6P3W7 929 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 RIOK1Q9BRS2 568 aaKnown RBP16.71■□□□□ 0.27
NID1-201ENST00000264187 USP26Q9BXU7 913 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
NID1-201ENST00000264187 DDB1Q16531 1140 aa16.71■□□□□ 0.26
NID1-201ENST00000264187 SPOUT1Q5T280 376 aaKnown RBP16.71■□□□□ 0.26
NID1-201ENST00000264187 PRPF6O94906 941 aaKnown RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 CAPN7Q9Y6W3 813 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 RGS16O15492 202 aaPredicted RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 STMN1P16949 149 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 ADKP55263 362 aaKnown RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 SFMBT2Q5VUG0 894 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 SMAP1Q8IYB5 467 aaPredicted RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 DISP3Q9P2K9 1392 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 FRMD3A2A2Y4 597 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 IFRD2Q12894 506 aaPredicted RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 KRT12Q99456 494 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 TNNI1P19237 187 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 TSTA3Q13630 321 aaPredicted RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 MRPL46Q9H2W6 279 aaKnown RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 VCX3AQ9NNX9 186 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 RNF40O75150 1001 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 UFL1O94874 794 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 ZNF202O95125 648 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 CTNNA1P35221 906 aaKnown RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 U2AF1L4Q8WU68 220 aaKnown RBP16.7■□□□□ 0.26
NID1-201ENST00000264187 RSAD2Q8WXG1 361 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 SEPT10Q9P0V9 454 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 USH1CQ9Y6N9 552 aa16.7■□□□□ 0.26
NID1-201ENST00000264187 GCKP35557 465 aa16.69■□□□□ 0.26
NID1-201ENST00000264187 PPP1R2P41236 205 aa16.69■□□□□ 0.26
NID1-201ENST00000264187 ATP2A3Q93084 1043 aa16.69■□□□□ 0.26
NID1-201ENST00000264187 BZW2Q9Y6E2 419 aaKnown RBP16.69■□□□□ 0.26
NID1-201ENST00000264187 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
NID1-201ENST00000264187 RLBP1P12271 317 aa16.69■□□□□ 0.26
NID1-201ENST00000264187 NOP9Q86U38 636 aaKnown RBP16.69■□□□□ 0.26
NID1-201ENST00000264187 PDZD8Q8NEN9 1154 aa16.69■□□□□ 0.26
NID1-201ENST00000264187 TSC1Q92574 1164 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms