RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
CXCR4-201ENST00000241393 SLIT1O75093 1534 aa9.76□□□□□ -0.85
CXCR4-201ENST00000241393 USP6P35125 1406 aa9.76□□□□□ -0.85
CXCR4-201ENST00000241393 TTC9Q92623 222 aa9.76□□□□□ -0.85
CXCR4-201ENST00000241393 RNF34Q969K3 372 aa9.76□□□□□ -0.85
CXCR4-201ENST00000241393 CEP44Q9C0F1 390 aa9.76□□□□□ -0.85
CXCR4-201ENST00000241393 TTC21AQ8NDW8 1320 aa9.76□□□□□ -0.85
CXCR4-201ENST00000241393 DIP2AQ14689 1571 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 ZBTB42B2RXF5 422 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 J3QW42 95 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 EIF5BO60841 1220 aaKnown RBP9.75□□□□□ -0.85
CXCR4-201ENST00000241393 RGS9O75916 674 aaPredicted RBP9.75□□□□□ -0.85
CXCR4-201ENST00000241393 FCGRTP55899 365 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 TWISTNBQ3B726 338 aaPredicted RBP9.75□□□□□ -0.85
CXCR4-201ENST00000241393 CEP135Q66GS9 1140 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 TTF2Q9UNY4 1162 aaKnown RBP9.75□□□□□ -0.85
CXCR4-201ENST00000241393 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.75□□□□□ -0.85
CXCR4-201ENST00000241393 KIAA0232Q92628 1395 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 DLG5Q8TDM6 1919 aa9.75□□□□□ -0.85
CXCR4-201ENST00000241393 FBLN1P23142 703 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 CABP4P57796 275 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 RPS26P11Q5JNZ5 115 aaPredicted RBP9.74□□□□□ -0.85
CXCR4-201ENST00000241393 DDX54Q8TDD1 881 aaKnown RBP9.74□□□□□ -0.85
CXCR4-201ENST00000241393 ANKRD24Q8TF21 1146 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 NXPE3Q969Y0 559 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 CNTNAP3BQ96NU0 1288 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 TCF12Q99081 682 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 CNTNAP3Q9BZ76 1288 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 RASSF4Q9H2L5 321 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 RNF19AQ9NV58 838 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 RGPD1P0DJD0 1748 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 ADAMTS2O95450 1211 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 BMP2KLQ5H9B9 411 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 CHD1LQ86WJ1 897 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 FCHSD1Q86WN1 690 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 ASAP3Q8TDY4 903 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 BSNDQ8WZ55 320 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 SMG9Q9H0W8 520 aaKnown RBP9.74□□□□□ -0.85
CXCR4-201ENST00000241393 MUC3BQ9H195 1237 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 AKAP2Q9Y2D5 859 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 TBX22Q9Y458 520 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 EID1Q9Y6B2 187 aa9.74□□□□□ -0.85
CXCR4-201ENST00000241393 ACEP12821 1306 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 ARHGEF10O15013 1369 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 EPXP11678 715 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 EIF4A2Q14240 407 aaKnown RBP9.73□□□□□ -0.85
CXCR4-201ENST00000241393 RRS1Q15050 365 aaKnown RBP9.73□□□□□ -0.85
CXCR4-201ENST00000241393 PSAPL1Q6NUJ1 521 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 THUMPD2Q9BTF0 503 aaKnown RBP9.73□□□□□ -0.85
CXCR4-201ENST00000241393 C22orf23Q9BZE7 217 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 ANTXR1Q9H6X2 564 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 ABCB6Q9NP58 842 aa9.73□□□□□ -0.85
CXCR4-201ENST00000241393 A0A096LPE4 126 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 A0A1W2PPZ6 126 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 LTKP29376 864 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 PERM1Q5SV97 790 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 GLIS3Q8NEA6 775 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 IGSF5Q9NSI5 407 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 KLF15Q9UIH9 416 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 ERBB4Q15303 1308 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 PTPRUQ92729 1446 aa9.72□□□□□ -0.85
CXCR4-201ENST00000241393 RIMS1Q86UR5 1692 aaKnown RBP9.72□□□□□ -0.85
CXCR4-201ENST00000241393 CHL1O00533 1208 aa9.71□□□□□ -0.85
CXCR4-201ENST00000241393 ITPKAP23677 461 aa9.71□□□□□ -0.85
CXCR4-201ENST00000241393 ATP11AP98196 1134 aa9.71□□□□□ -0.85
CXCR4-201ENST00000241393 MAP3K10Q02779 954 aa9.71□□□□□ -0.85
CXCR4-201ENST00000241393 PWP1Q13610 501 aa9.71□□□□□ -0.85
CXCR4-201ENST00000241393 INTS3Q68E01 1043 aaKnown RBP9.71□□□□□ -0.85
CXCR4-201ENST00000241393 NOC4LQ9BVI4 516 aaKnown RBP9.71□□□□□ -0.85
CXCR4-201ENST00000241393 SAMM50Q9Y512 469 aa9.71□□□□□ -0.85
CXCR4-201ENST00000241393 ANKARQ7Z5J8 1434 aa9.71□□□□□ -0.85
CXCR4-201ENST00000241393 SBNO1A3KN83 1393 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 FRAT2O75474 233 aaPredicted RBP9.71□□□□□ -0.86
CXCR4-201ENST00000241393 PTPRCP08575 1304 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 BCRP11274 1271 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 PPP2R3AQ06190 1150 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 SULT6B1Q6IMI4 303 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 FAM117BQ6P1L5 589 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 SV2BQ7L1I2 683 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 C8orf58Q8NAV2 365 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 EDARADDQ8WWZ3 215 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 MDFIQ99750 246 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 ENAMQ9NRM1 1142 aa9.71□□□□□ -0.86
CXCR4-201ENST00000241393 FLT4P35916 1363 aa9.7□□□□□ -0.86
CXCR4-201ENST00000241393 KDRP35968 1356 aa9.7□□□□□ -0.86
CXCR4-201ENST00000241393 NFKBIEO00221 500 aa9.7□□□□□ -0.86
CXCR4-201ENST00000241393 WFS1O76024 890 aa9.7□□□□□ -0.86
CXCR4-201ENST00000241393 CTSHP09668 335 aa9.7□□□□□ -0.86
CXCR4-201ENST00000241393 CDC27P30260 824 aa9.7□□□□□ -0.86
CXCR4-201ENST00000241393 SNX21Q969T3 373 aa9.7□□□□□ -0.86
CXCR4-201ENST00000241393 PEAK1Q9H792 1746 aa9.69□□□□□ -0.86
CXCR4-201ENST00000241393 LILRB5O75023 590 aa9.69□□□□□ -0.86
CXCR4-201ENST00000241393 SLURP2P0DP57 97 aa9.69□□□□□ -0.86
CXCR4-201ENST00000241393 ACPPP15309 386 aa9.69□□□□□ -0.86
CXCR4-201ENST00000241393 AMPD1P23109 780 aa9.69□□□□□ -0.86
CXCR4-201ENST00000241393 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms