RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 NRAPQ86VF7 1730 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 JAK2O60674 1132 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 IL6STP40189 918 aaPredicted RBP15.46■□□□□ 0.07
GABPB1-201ENST00000220429 CCT5P48643 541 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 METTL24Q5JXM2 366 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 WLSQ5T9L3 541 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 ARMCX5Q6P1M9 558 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 LDHAL6AQ6ZMR3 332 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 BRF1Q92994 677 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 CAPN7Q9Y6W3 813 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 UBN2Q6ZU65 1347 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 KINO60870 393 aaKnown RBP15.46■□□□□ 0.07
GABPB1-201ENST00000220429 AP1G2O75843 785 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 PI16Q6UXB8 463 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
GABPB1-201ENST00000220429 DZIP3Q86Y13 1208 aaKnown RBP15.46■□□□□ 0.07
GABPB1-201ENST00000220429 L1RE1Q9UN81 338 aa15.46■□□□□ 0.07
GABPB1-201ENST00000220429 SLIT2O94813 1529 aa15.46■□□□□ 0.06
GABPB1-201ENST00000220429 ERVV-1B6SEH8 477 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 HMGB1P09429 215 aaKnown RBP15.45■□□□□ 0.06
GABPB1-201ENST00000220429 GCKP35557 465 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 ZAP70P43403 619 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 CCT2P78371 535 aaKnown RBP15.45■□□□□ 0.06
GABPB1-201ENST00000220429 MTA1Q13330 715 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 RBBP5Q15291 538 aaKnown RBP15.45■□□□□ 0.06
GABPB1-201ENST00000220429 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-201ENST00000220429 MPHOSPH8Q99549 860 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 E7EWF7 191 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 EXOSC10Q01780 885 aaKnown RBP15.45■□□□□ 0.06
GABPB1-201ENST00000220429 FAM173BQ6P4H8 233 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 KLHL23Q8NBE8 558 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 AFAP1L1Q8TED9 768 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 MRFAP1Q9Y605 127 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 FOXP2O15409 715 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 ERLIN1O75477 346 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 ADAMTS2O95450 1211 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 USP5P45974 858 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 CLNS1AP54105 237 aaKnown RBP15.45■□□□□ 0.06
GABPB1-201ENST00000220429 VGLL2Q8N8G2 317 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 MICAL1Q8TDZ2 1067 aa15.45■□□□□ 0.06
GABPB1-201ENST00000220429 SPATA31A1Q5TZJ5 1347 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 ABCC12Q96J65 1359 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 MYH14Q7Z406 1995 aaKnown RBP15.44■□□□□ 0.06
GABPB1-201ENST00000220429 RPS6KA3P51812 740 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 PSMD2Q13200 908 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 AGXT2Q9BYV1 514 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 CNNM1Q9NRU3 951 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 MYO1FO00160 1098 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 PDE8AO60658 829 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 SNUPNO95149 360 aaKnown RBP15.44■□□□□ 0.06
GABPB1-201ENST00000220429 ATP2B2Q01814 1243 aa15.44■□□□□ 0.06
GABPB1-201ENST00000220429 NR1I2O75469 434 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 ZFYP08048 801 aaPredicted RBP15.43■□□□□ 0.06
GABPB1-201ENST00000220429 MCAMP43121 646 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 WASHC4Q2M389 1173 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 AMOTL1Q8IY63 956 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 KIF9Q9HAQ2 790 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 PFKFB2O60825 505 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 FNTAP49354 379 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 DDB1Q16531 1140 aa15.43■□□□□ 0.06
GABPB1-201ENST00000220429 CDCA7Q9BWT1 371 aaPredicted RBP15.43■□□□□ 0.06
GABPB1-201ENST00000220429 PHLPP1O60346 1717 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 C1QTNF12Q5T7M4 302 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 INTS5Q6P9B9 1019 aaKnown RBP15.42■□□□□ 0.06
GABPB1-201ENST00000220429 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 SMARCC2Q8TAQ2 1214 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 PUS7LQ9H0K6 701 aaKnown RBP15.42■□□□□ 0.06
GABPB1-201ENST00000220429 SUGCTQ9HAC7 445 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 FRMD3A2A2Y4 597 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 CASP8Q14790 479 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 STX1AQ16623 288 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
GABPB1-201ENST00000220429 BICD2Q8TD16 824 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 ACSBG1Q96GR2 724 aa15.42■□□□□ 0.06
GABPB1-201ENST00000220429 A0A0G2JS52 829 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 RNF40O75150 1001 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 CHST3Q7LGC8 479 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 TMC6Q7Z403 805 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 PARD3BQ8TEW8 1205 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 APPBP2Q92624 585 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 ABCB6Q9NP58 842 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 RAB21Q9UL25 225 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 LRP5O75197 1615 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 MYH15Q9Y2K3 1946 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 PDE8BO95263 885 aa15.41■□□□□ 0.06
GABPB1-201ENST00000220429 MARCH10Q8NA82 808 aaPredicted RBP15.41■□□□□ 0.06
GABPB1-201ENST00000220429 THRAP3Q9Y2W1 955 aaKnown RBP15.41■□□□□ 0.06
GABPB1-201ENST00000220429 POTEB2H3BUK9 544 aa15.4■□□□□ 0.06
GABPB1-201ENST00000220429 SKAP2O75563 359 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-201ENST00000220429 CTDNEP1O95476 244 aa15.4■□□□□ 0.06
GABPB1-201ENST00000220429 FAM177A1Q8N128 213 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-201ENST00000220429 NSUN7Q8NE18 718 aaKnown RBP15.4■□□□□ 0.06
GABPB1-201ENST00000220429 SCAND2PQ9GZW5 306 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-201ENST00000220429 ANKZF1Q9H8Y5 726 aa15.4■□□□□ 0.06
GABPB1-201ENST00000220429 PRDM16Q9HAZ2 1276 aa15.4■□□□□ 0.06
GABPB1-201ENST00000220429 CCDC87Q9NVE4 849 aa15.4■□□□□ 0.06
GABPB1-201ENST00000220429 RREB1Q92766 1687 aa15.4■□□□□ 0.06
GABPB1-201ENST00000220429 FSBPO95073 299 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms