RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Yars2Q8BYL4 472 aaKnown RBP15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Yeats4Q9CR11 227 aaKnown RBP15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Knop1Q9Z2Q2 478 aaKnown RBP15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Zfp51Q3U4L8 781 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Usp28Q5I043 1051 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Mns1Q61884 491 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 PaoxQ8C0L6 504 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Klhl30Q8C3F7 581 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Commd10Q8JZY2 202 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Clec11aO88200 328 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Pfkfb1P70266 471 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Fbxo2Q80UW2 297 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Sec62Q8BU14 398 aaKnown RBP15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 CerkQ8K4Q7 531 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Pagr1bF6V0H0 108 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 C87499Q3UX49 493 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ube3cQ80U95 1083 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Cyp4f39Q8BGU0 532 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 WaslQ91YD9 501 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Pagr1aQ99L02 253 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Psd3Q2PFD7 1037 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 1810065E05RikQ5NC41 235 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Trim25Q61510 634 aaKnown RBP15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Hexim1Q8R409 356 aaKnown RBP15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Gpaa1Q9WTK3 621 aa15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 AdnpQ9Z103 1108 aaKnown RBP15.18■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Taf3Q5HZG4 932 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Krt79Q8VED5 531 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 NapaQ9DB05 295 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Tfap4Q9JIZ5 338 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 C5P06684 1680 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ttll12Q3UDE2 639 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Bst2Q8R2Q8 172 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Azi2Q9QYP6 405 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Fam186bD3Z420 943 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 SsbP32067 415 aaKnown RBP15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Kcna4Q61423 654 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Tmco3Q8BH01 678 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ccnt1Q9QWV9 724 aaKnown RBP15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ccdc51Q3URS9 406 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Alx1Q8C8B0 326 aa15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Nop2Q922K7 793 aaKnown RBP15.17■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Dnaaf4Q8R368 420 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Kiaa0232Q80U59 1396 aaKnown RBP15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Tns2Q8CGB6 1400 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Arap3Q8R5G7 1538 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Prss40A6H6T1 365 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Kif23E9Q5G3 953 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Parp2O88554 559 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ctdspl2Q8BG15 465 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Lrrd1Q8C0R9 853 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Spire2Q8K1S6 718 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 OscarQ8VBT3 265 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Grem2O88273 168 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Pdia4P08003 638 aaKnown RBP15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ctr9Q62018 1173 aaKnown RBP15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Tmem132aQ922P8 1018 aa15.16■□□□□ 0.02
Clcn3-204ENSMUST00000110301 NalcnQ8BXR5 1738 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Cyp2j7A0A140T8U1 504 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Rrp1P56183 494 aaKnown RBP15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 CpzQ8R4V4 654 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 N4bp2F8VQG7 1678 aaKnown RBP15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Dnajc25A2ALW5 357 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ifi207E9Q3L4 978 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Exosc10P56960 887 aaKnown RBP15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Atxn2lQ7TQH0 1049 aaKnown RBP15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Serpina10Q8R121 448 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Cdk8Q8R3L8 464 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Hps3Q91VB4 1002 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Uchl5Q9WUP7 329 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Slc18a1Q8R090 521 aa15.15■□□□□ 0.02
Clcn3-204ENSMUST00000110301 D430041D05RikF6ZGR6 1678 aa15.14■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Carmil3Q3UFQ8 1375 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Pls1Q3V0K9 630 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Kctd1Q5M956 257 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ift88Q61371 824 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Exoc8Q6PGF7 716 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 VmacQ8BP01 174 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ccdc105Q9D4K7 499 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 AmfrQ9R049 643 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Pank2Q3U4S0 443 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Islr2Q5RKR3 745 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Zkscan4Q5SZT6 480 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Tsg101Q61187 391 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Gpbp1Q6NXH3 473 aaKnown RBP15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Exoc1Q8R3S6 894 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Chaf1aQ9QWF0 911 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Clrn2B2RVW2 232 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Parp1P11103 1013 aaKnown RBP15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 PpardP35396 440 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Mum1l1Q4VA55 681 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 GnptabQ69ZN6 1235 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 LpxnQ99N69 386 aa15.14■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Rsph10bE9PYQ0 876 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Dnaaf2Q8BPI1 814 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 GdaQ9R111 454 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Ccdc162pQ0VG85 912 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Znhit6Q3UFB2 460 aaKnown RBP15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Fam198bQ3UPI1 517 aa15.13■□□□□ 0.01
Clcn3-204ENSMUST00000110301 Glra4Q61603 456 aa15.13■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms